STRINGSTRING
SNRPC SNRPC G3N6Z3_GASAC G3N6Z3_GASAC G3NBG7_GASAC G3NBG7_GASAC G3NGR4_GASAC G3NGR4_GASAC G3QCE0_GASAC G3QCE0_GASAC G3Q9E8_GASAC G3Q9E8_GASAC G3Q7P5_GASAC G3Q7P5_GASAC G3Q274_GASAC G3Q274_GASAC G3Q1S0_GASAC G3Q1S0_GASAC G3PQJ2_GASAC G3PQJ2_GASAC G3PNV6_GASAC G3PNV6_GASAC G3NP48_GASAC G3NP48_GASAC G3PNF0_GASAC G3PNF0_GASAC G3P8Z0_GASAC G3P8Z0_GASAC G3P105_GASAC G3P105_GASAC G3P0T2_GASAC G3P0T2_GASAC G3NY16_GASAC G3NY16_GASAC G3NM42_GASAC G3NM42_GASAC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (149 aa)
G3N6Z3_GASACSplicing factor 1. (576 aa)
G3NBG7_GASACRNA-binding region (RNP1, RRM) containing 3. (517 aa)
G3NGR4_GASACU2 small nuclear RNA auxiliary factor 1. (239 aa)
G3QCE0_GASACRNA binding motif protein 41. (390 aa)
G3Q9E8_GASACExoribonuclease 1. (328 aa)
G3Q7P5_GASACStem-loop binding protein. (246 aa)
G3Q274_GASACSLU7 homolog, splicing factor. (567 aa)
G3Q1S0_GASACRNA binding motif protein 22. (427 aa)
G3PQJ2_GASACZinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2. (574 aa)
G3PNV6_GASACUncharacterized protein. (228 aa)
G3NP48_GASACRNA binding motif protein 24a. (220 aa)
G3PNF0_GASACU2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (471 aa)
G3P8Z0_GASACU2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (459 aa)
G3P105_GASACPre-mRNA processing factor 8. (2344 aa)
G3P0T2_GASACRNA binding motif protein 24b. (222 aa)
G3NY16_GASACE1A binding protein p300 b. (2411 aa)
G3NM42_GASACE1A binding protein p300 a. (2344 aa)
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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