86 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3NVU7_GASAC	Uncharacterized protein. (265 aa)
	LYZ	Lysozyme; Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Belongs to the glycosyl hydrolase 22 family. (147 aa)
	G3NA67_GASAC	Uncharacterized protein. (985 aa)
	G3N9P1_GASAC	Tumor suppressor 2, mitochondrial calcium regulator b. (111 aa)
	G3N9F0_GASAC	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate. (726 aa)
	G3N9B2_GASAC	ADAM metallopeptidase domain 17b. (817 aa)
	G3N9A3_GASAC	Protein phosphatase 1, regulatory (inhibitor) subunit 11. (125 aa)
	G3N8P4_GASAC	Tumor suppressor 2, mitochondrial calcium regulator a. (111 aa)
	G3N8N4_GASAC	Immunoglobulin heavy variable 6-1. (117 aa)
	G3N8N3_GASAC	Uncharacterized protein. (227 aa)
	G3N7X1_GASAC	Uncharacterized protein. (215 aa)
	G3N6K3_GASAC	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family. (395 aa)
	G3N608_GASAC	Uncharacterized protein. (231 aa)
	G3N5N7_GASAC	TNF_2 domain-containing protein. (238 aa)
	G3Q257_GASAC	Spondin 2a, extracellular matrix protein. (333 aa)
	G3PZE0_GASAC	Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (261 aa)
	G3Q117_GASAC	SHANK-associated RH domain interacting protein. (403 aa)
	DHX15	DEAH-box helicase 15. (753 aa)
	G3NSB5_GASAC	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate. (727 aa)
	G3NSE8_GASAC	Peptidoglycan recognition protein 6. (277 aa)
	G3NTJ8_GASAC	TIR domain-containing protein. (52 aa)
	G3NVU5_GASAC	Uncharacterized protein. (647 aa)
	G3Q6N9_GASAC	Lysozyme g. (202 aa)
	G3Q6M8_GASAC	Peptidoglycan recognition protein 2. (335 aa)
	G3Q4A0_GASAC	Fibrinogen beta chain. (499 aa)
	IL12B-3	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (357 aa)
	PLA2G1B	Phospholipase A(2). (150 aa)
	G3PFW0_GASAC	Uncharacterized protein. (90 aa)
	G3NDD5_GASAC	Sharpin_PH domain-containing protein. (131 aa)
	G3NDD0_GASAC	Sharpin and rbck1 related. (507 aa)
	G3NA69_GASAC	Ig-like domain-containing protein. (115 aa)
	G3PGY4_GASAC	Ig-like domain-containing protein. (115 aa)
	G3PH07_GASAC	Immunoglobulin heavy variable 6-1. (136 aa)
	G3PH29_GASAC	Ig-like domain-containing protein. (115 aa)
	G3PH40_GASAC	Ig-like domain-containing protein. (117 aa)
	LGALS4	Galectin. (365 aa)
	G3PIC5_GASAC	TNFR-Cys domain-containing protein. (156 aa)
	G3PJN1_GASAC	Fibronectin type-III domain-containing protein. (426 aa)
	G3PN34_GASAC	Ring finger protein 213b. (3824 aa)
	il1b	Interleukin-1. (262 aa)
	G3PPR4_GASAC	Uncharacterized protein. (1021 aa)
	ADAMTS5	ADAM metallopeptidase with thrombospondin type 1 motif 5. (880 aa)
	G3PRZ3_GASAC	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family. (618 aa)
	G3NDE5_GASAC	Uncharacterized protein. (77 aa)
	G3NHA9_GASAC	Reactive oxygen species modulator 1. (79 aa)
	G3NHE9_GASAC	Ribosomal protein L30. (116 aa)
	G3NIT0_GASAC	Stabilin 1. (1276 aa)
	G3NIU8_GASAC	Uncharacterized protein. (668 aa)
	TLR5	Toll like receptor 5; Belongs to the Toll-like receptor family. (883 aa)
	G3NKT4_GASAC	Nucleotide-binding oligomerization domain containing 1. (948 aa)
	G3NMG0_GASAC	Nuclear receptor subfamily 1, group H, member 5. (460 aa)
	G3NPU8_GASAC	Uncharacterized protein. (427 aa)
	G3NPV2_GASAC	Uncharacterized protein. (258 aa)
	G3NWH7_GASAC	Macrophage expressed 1, tandem duplicate 2. (710 aa)
	G3P007_GASAC	Akirin 2. (179 aa)
	G3P2F0_GASAC	ADAM metallopeptidase domain 17a. (859 aa)
	G3P2X0_GASAC	Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1509 aa)
	AKIRIN2	Akirin 2. (184 aa)
	G3P3K5_GASAC	NK-lysin tandem duplicate 4. (146 aa)
	G3P4B8_GASAC	TATA element modulatory factor 1. (642 aa)
	G3P7A3_GASAC	Tumor necrosis factor receptor superfamily, member 1a. (394 aa)
	G3P8J1_GASAC	Activation-induced cytidine deaminase. (211 aa)
	G3P997_GASAC	Uncharacterized protein. (506 aa)
	G3NRM7_GASAC	Zinc finger, NFX1-type containing 1. (1781 aa)
	G3NRN3_GASAC	Jacalin-type lectin domain-containing protein. (168 aa)
	G3NRQ1_GASAC	RanBP-type and C3HC4-type zinc finger containing 1. (418 aa)
	G3PZC8_GASAC	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (272 aa)
	G3PZ68_GASAC	MORN repeat containing 5. (178 aa)
	G3PY44_GASAC	C-type lectin domain-containing protein. (745 aa)
	G3PSY9_GASAC	Placenta associated 8, tandem duplicate 1. (110 aa)
	G3PT47_GASAC	Caspase recruitment domain family, member 9. (364 aa)
	G3PU63_GASAC	Receptor-interacting serine-threonine kinase 2. (590 aa)
	G3PVQ7_GASAC	Spondin 2b, extracellular matrix protein. (344 aa)
	G3PFF1_GASAC	CARD domain-containing protein. (97 aa)
	G3PB07_GASAC	Ring finger protein 213a. (4287 aa)
	G3PD21_GASAC	Uncharacterized protein. (480 aa)
	G3PD53_GASAC	Uncharacterized protein. (189 aa)
	G3PD77_GASAC	Nuclear receptor subfamily 1, group H, member 4. (485 aa)
	G3PDG4_GASAC	CCAAT enhancer binding protein beta. (284 aa)
	G3PFE4_GASAC	PYD and CARD domain containing. (168 aa)
	G3PFE7_GASAC	PYD and CARD domain containing. (196 aa)
	G3PWS9_GASAC	Nucleotide-binding oligomerization domain containing 2. (1016 aa)
	G3PX38_GASAC	Uncharacterized protein. (172 aa)
	IL12B	Interleukin 12B, b. (322 aa)
	G3Q8N1_GASAC	Phospholipase A2, group VI (cytosolic, calcium-independent). (820 aa)
	G3Q7K1_GASAC	DEAH (Asp-Glu-Ala-His) box helicase 15. (759 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADAMTS5	il1b	ENSGACP00000019882	ENSGACP00000019287	ADAM metallopeptidase with thrombospondin type 1 motif 5.	Interleukin-1.	0.448
DHX15	G3N9F0_GASAC	ENSGACP00000023570	ENSGACP00000001940	DEAH-box helicase 15.	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	0.419
DHX15	G3NA67_GASAC	ENSGACP00000023570	ENSGACP00000002210	DEAH-box helicase 15.	Uncharacterized protein.	0.443
DHX15	G3NDE5_GASAC	ENSGACP00000023570	ENSGACP00000003345	DEAH-box helicase 15.	Uncharacterized protein.	0.443
DHX15	G3NPU8_GASAC	ENSGACP00000023570	ENSGACP00000007363	DEAH-box helicase 15.	Uncharacterized protein.	0.438
DHX15	G3NPV2_GASAC	ENSGACP00000023570	ENSGACP00000007367	DEAH-box helicase 15.	Uncharacterized protein.	0.438
DHX15	G3NSB5_GASAC	ENSGACP00000023570	ENSGACP00000008232	DEAH-box helicase 15.	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	0.419
DHX15	G3NVU5_GASAC	ENSGACP00000023570	ENSGACP00000009464	DEAH-box helicase 15.	Uncharacterized protein.	0.416
DHX15	G3NVU7_GASAC	ENSGACP00000023570	ENSGACP00000009466	DEAH-box helicase 15.	Uncharacterized protein.	0.416
DHX15	G3PPR4_GASAC	ENSGACP00000023570	ENSGACP00000019599	DEAH-box helicase 15.	Uncharacterized protein.	0.443
DHX15	TLR5	ENSGACP00000023570	ENSGACP00000005783	DEAH-box helicase 15.	Toll like receptor 5; Belongs to the Toll-like receptor family.	0.416
G3N5N7_GASAC	G3P7A3_GASAC	ENSGACP00000000611	ENSGACP00000013477	TNF_2 domain-containing protein.	Tumor necrosis factor receptor superfamily, member 1a.	0.944
G3N5N7_GASAC	G3PIC5_GASAC	ENSGACP00000000611	ENSGACP00000017352	TNF_2 domain-containing protein.	TNFR-Cys domain-containing protein.	0.841
G3N608_GASAC	G3NA67_GASAC	ENSGACP00000000732	ENSGACP00000002210	Uncharacterized protein.	Uncharacterized protein.	0.455
G3N608_GASAC	G3NDE5_GASAC	ENSGACP00000000732	ENSGACP00000003345	Uncharacterized protein.	Uncharacterized protein.	0.455
G3N608_GASAC	G3PPR4_GASAC	ENSGACP00000000732	ENSGACP00000019599	Uncharacterized protein.	Uncharacterized protein.	0.455
G3N608_GASAC	G3PU63_GASAC	ENSGACP00000000732	ENSGACP00000021150	Uncharacterized protein.	Receptor-interacting serine-threonine kinase 2.	0.427
G3N608_GASAC	il1b	ENSGACP00000000732	ENSGACP00000019287	Uncharacterized protein.	Interleukin-1.	0.501
G3N6K3_GASAC	G3PRZ3_GASAC	ENSGACP00000000928	ENSGACP00000020379	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.637
G3N6K3_GASAC	G3Q4A0_GASAC	ENSGACP00000000928	ENSGACP00000024704	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family.	Fibrinogen beta chain.	0.653