(25 nodes) Sarcomere organization network (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3P5I8_GASAC	Troponin T type 2a (cardiac). (289 aa)
	G3NN08_GASAC	Cysteine and glycine-rich protein 1b. (194 aa)
	G3PXZ0_GASAC	ORAI calcium release-activated calcium modulator 1b. (224 aa)
	G3PLG7_GASAC	Kelch-like family member 41b. (609 aa)
	G3PJK7_GASAC	Leucine rich repeat containing 39. (360 aa)
	G3PCD1_GASAC	Uncharacterized protein. (580 aa)
	G3PA22_GASAC	Uncharacterized protein. (306 aa)
	G3Q9A1_GASAC	Troponin T2c, cardiac. (237 aa)
	G3NEL6_GASAC	Synaptopodin 2-like b. (934 aa)
	SRF	Serum response factor. (507 aa)
	G3NN46_GASAC	Troponin T type 2b (cardiac). (237 aa)
	G3PY73_GASAC	Cysteine and glycine-rich protein 3 (cardiac LIM protein). (188 aa)
	G3PZ83_GASAC	Uncharacterized protein. (257 aa)
	G3Q0Y1_GASAC	Myozenin 2b. (255 aa)
	G3Q772_GASAC	Cysteine and glycine-rich protein 2. (192 aa)
	G3Q7G0_GASAC	Myozenin 2a. (267 aa)
	G3Q958_GASAC	MADS-box domain-containing protein. (473 aa)
	G3P5E9_GASAC	Cysteine and glycine-rich protein 1a. (194 aa)
	G3NJL9_GASAC	Uncharacterized protein. (242 aa)
	WDR1	WD repeat domain 1. (607 aa)
	G3P2I5_GASAC	Titin-cap (telethonin). (180 aa)
	G3P0M2_GASAC	Troponin T type 3a (skeletal, fast). (281 aa)
	G3NZ33_GASAC	Uncharacterized protein. (226 aa)
	G3NTV2_GASAC	Troponin T type 1 (skeletal, slow). (260 aa)
	G3NNE0_GASAC	Kelch-like family member 41a. (598 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NJL9_GASAC	G3NN46_GASAC	ENSGACP00000005531	ENSGACP00000006759	Uncharacterized protein.	Troponin T type 2b (cardiac).	0.914
G3NJL9_GASAC	G3NTV2_GASAC	ENSGACP00000005531	ENSGACP00000008770	Uncharacterized protein.	Troponin T type 1 (skeletal, slow).	0.472
G3NJL9_GASAC	G3P0M2_GASAC	ENSGACP00000005531	ENSGACP00000011145	Uncharacterized protein.	Troponin T type 3a (skeletal, fast).	0.597
G3NJL9_GASAC	G3P2I5_GASAC	ENSGACP00000005531	ENSGACP00000011808	Uncharacterized protein.	Titin-cap (telethonin).	0.506
G3NJL9_GASAC	G3P5I8_GASAC	ENSGACP00000005531	ENSGACP00000012861	Uncharacterized protein.	Troponin T type 2a (cardiac).	0.895
G3NJL9_GASAC	G3PA22_GASAC	ENSGACP00000005531	ENSGACP00000014446	Uncharacterized protein.	Uncharacterized protein.	0.570
G3NJL9_GASAC	G3PLG7_GASAC	ENSGACP00000005531	ENSGACP00000018448	Uncharacterized protein.	Kelch-like family member 41b.	0.449
G3NJL9_GASAC	G3PZ83_GASAC	ENSGACP00000005531	ENSGACP00000022923	Uncharacterized protein.	Uncharacterized protein.	0.587
G3NJL9_GASAC	G3Q7G0_GASAC	ENSGACP00000005531	ENSGACP00000025820	Uncharacterized protein.	Myozenin 2a.	0.592
G3NJL9_GASAC	G3Q9A1_GASAC	ENSGACP00000005531	ENSGACP00000026466	Uncharacterized protein.	Troponin T2c, cardiac.	0.862
G3NN46_GASAC	G3NJL9_GASAC	ENSGACP00000006759	ENSGACP00000005531	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.914
G3NN46_GASAC	G3NTV2_GASAC	ENSGACP00000006759	ENSGACP00000008770	Troponin T type 2b (cardiac).	Troponin T type 1 (skeletal, slow).	0.596
G3NN46_GASAC	G3NZ33_GASAC	ENSGACP00000006759	ENSGACP00000010604	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.513
G3NN46_GASAC	G3P0M2_GASAC	ENSGACP00000006759	ENSGACP00000011145	Troponin T type 2b (cardiac).	Troponin T type 3a (skeletal, fast).	0.599
G3NN46_GASAC	G3P2I5_GASAC	ENSGACP00000006759	ENSGACP00000011808	Troponin T type 2b (cardiac).	Titin-cap (telethonin).	0.556
G3NN46_GASAC	G3PA22_GASAC	ENSGACP00000006759	ENSGACP00000014446	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.586
G3NN46_GASAC	G3PZ83_GASAC	ENSGACP00000006759	ENSGACP00000022923	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.723
G3NN46_GASAC	G3Q7G0_GASAC	ENSGACP00000006759	ENSGACP00000025820	Troponin T type 2b (cardiac).	Myozenin 2a.	0.534
G3NN46_GASAC	G3Q9A1_GASAC	ENSGACP00000006759	ENSGACP00000026466	Troponin T type 2b (cardiac).	Troponin T2c, cardiac.	0.872
G3NTV2_GASAC	G3NJL9_GASAC	ENSGACP00000008770	ENSGACP00000005531	Troponin T type 1 (skeletal, slow).	Uncharacterized protein.	0.472