STRINGSTRING
casp10 casp10 G3NEH6_GASAC G3NEH6_GASAC G3NH46_GASAC G3NH46_GASAC G3PH53_GASAC G3PH53_GASAC casp8 casp8 G3PN13_GASAC G3PN13_GASAC G3QAM1_GASAC G3QAM1_GASAC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
casp10Uncharacterized protein; Belongs to the peptidase C14A family. (472 aa)
G3NEH6_GASACColony stimulating factor 1b (macrophage). (270 aa)
G3NH46_GASACC1q domain-containing protein. (234 aa)
G3PH53_GASACTransforming growth factor beta; Belongs to the TGF-beta family. (395 aa)
casp8Uncharacterized protein; Belongs to the peptidase C14A family. (482 aa)
G3PN13_GASACUncharacterized protein. (192 aa)
G3QAM1_GASACRetinoblastoma 1. (911 aa)
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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