(10 nodes) Viral budding network (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3NPV3_GASAC	Programmed cell death 6 interacting protein. (875 aa)
	G3NBS1_GASAC	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (436 aa)
	G3Q4L1_GASAC	Uncharacterized protein. (288 aa)
	G3Q3N6_GASAC	Leucine rich repeat and sterile alpha motif containing 1. (717 aa)
	G3Q2Y8_GASAC	Multivesicular body subunit 12Ba. (295 aa)
	G3PJY8_GASAC	Vesicle (multivesicular body) trafficking 1. (310 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (439 aa)
	G3PE65_GASAC	Multivesicular body subunit 12Bb. (261 aa)
	G3PBK8_GASAC	Tumor susceptibility 101a. (390 aa)
	G3PAD9_GASAC	Uncharacterized protein; Belongs to the AAA ATPase family. (435 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NBS1_GASAC	G3NPV3_GASAC	ENSGACP00000002768	ENSGACP00000007368	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	Programmed cell death 6 interacting protein.	0.842
G3NBS1_GASAC	G3PAD9_GASAC	ENSGACP00000002768	ENSGACP00000014563	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.840
G3NBS1_GASAC	G3PBK8_GASAC	ENSGACP00000002768	ENSGACP00000014982	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	Tumor susceptibility 101a.	0.647
G3NBS1_GASAC	G3PJY8_GASAC	ENSGACP00000002768	ENSGACP00000017918	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	Vesicle (multivesicular body) trafficking 1.	0.986
G3NBS1_GASAC	VPS4B	ENSGACP00000002768	ENSGACP00000017633	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.840
G3NPV3_GASAC	G3NBS1_GASAC	ENSGACP00000007368	ENSGACP00000002768	Programmed cell death 6 interacting protein.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.842
G3NPV3_GASAC	G3PAD9_GASAC	ENSGACP00000007368	ENSGACP00000014563	Programmed cell death 6 interacting protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.842
G3NPV3_GASAC	G3PBK8_GASAC	ENSGACP00000007368	ENSGACP00000014982	Programmed cell death 6 interacting protein.	Tumor susceptibility 101a.	0.966
G3NPV3_GASAC	G3PE65_GASAC	ENSGACP00000007368	ENSGACP00000015889	Programmed cell death 6 interacting protein.	Multivesicular body subunit 12Bb.	0.867
G3NPV3_GASAC	G3PJY8_GASAC	ENSGACP00000007368	ENSGACP00000017918	Programmed cell death 6 interacting protein.	Vesicle (multivesicular body) trafficking 1.	0.684
G3NPV3_GASAC	G3Q2Y8_GASAC	ENSGACP00000007368	ENSGACP00000024237	Programmed cell death 6 interacting protein.	Multivesicular body subunit 12Ba.	0.867
G3NPV3_GASAC	G3Q4L1_GASAC	ENSGACP00000007368	ENSGACP00000024815	Programmed cell death 6 interacting protein.	Uncharacterized protein.	0.869
G3NPV3_GASAC	VPS4B	ENSGACP00000007368	ENSGACP00000017633	Programmed cell death 6 interacting protein.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.842
G3PAD9_GASAC	G3NBS1_GASAC	ENSGACP00000014563	ENSGACP00000002768	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.840
G3PAD9_GASAC	G3NPV3_GASAC	ENSGACP00000014563	ENSGACP00000007368	Uncharacterized protein; Belongs to the AAA ATPase family.	Programmed cell death 6 interacting protein.	0.842
G3PAD9_GASAC	G3PBK8_GASAC	ENSGACP00000014563	ENSGACP00000014982	Uncharacterized protein; Belongs to the AAA ATPase family.	Tumor susceptibility 101a.	0.647
G3PAD9_GASAC	G3PJY8_GASAC	ENSGACP00000014563	ENSGACP00000017918	Uncharacterized protein; Belongs to the AAA ATPase family.	Vesicle (multivesicular body) trafficking 1.	0.986
G3PBK8_GASAC	G3NBS1_GASAC	ENSGACP00000014982	ENSGACP00000002768	Tumor susceptibility 101a.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.647
G3PBK8_GASAC	G3NPV3_GASAC	ENSGACP00000014982	ENSGACP00000007368	Tumor susceptibility 101a.	Programmed cell death 6 interacting protein.	0.966
G3PBK8_GASAC	G3PAD9_GASAC	ENSGACP00000014982	ENSGACP00000014563	Tumor susceptibility 101a.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.647