(19 nodes) Thymus development network (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3N3Z9_GASAC	Si:dkey-49n23.1; Belongs to the semaphorin family. (687 aa)
	G3N5A8_GASAC	WD repeat-containing protein 55; Nucleolar protein that acts as a modulator of rRNA synthesis. Plays a central role during organogenesis. Belongs to the WD repeat WDR55 family. (386 aa)
	SRF	Serum response factor. (507 aa)
	G3NV93_GASAC	Non-specific serine/threonine protein kinase. (3105 aa)
	G3NVA2_GASAC	TAN domain-containing protein. (315 aa)
	G3P107_GASAC	Mediator complex subunit 24. (991 aa)
	G3P1A4_GASAC	Forkhead box N1. (496 aa)
	G3P1Y2_GASAC	Spliceosome associated factor 3, U4/U6 recycling protein. (901 aa)
	G3P3T9_GASAC	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (462 aa)
	G3PC30_GASAC	Recombination activating gene 2. (533 aa)
	G3PGA2_GASAC	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (226 aa)
	G3PGT6_GASAC	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family. (779 aa)
	G3PI38_GASAC	T-box transcription factor 1. (460 aa)
	G3PKS1_GASAC	Zinc finger and BTB domain containing 1. (654 aa)
	G3PN13_GASAC	Uncharacterized protein. (192 aa)
	G3PW04_GASAC	Mitotic arrest deficient 1 like 1. (716 aa)
	G3Q0W2_GASAC	Solute carrier family 46 member 2. (425 aa)
	G3Q4Y9_GASAC	Protein kinase domain-containing protein. (311 aa)
	G3Q958_GASAC	MADS-box domain-containing protein. (473 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NV93_GASAC	G3PGA2_GASAC	ENSGACP00000009262	ENSGACP00000016626	Non-specific serine/threonine protein kinase.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.492
G3NV93_GASAC	G3PN13_GASAC	ENSGACP00000009262	ENSGACP00000018996	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.514
G3NV93_GASAC	G3Q4Y9_GASAC	ENSGACP00000009262	ENSGACP00000024943	Non-specific serine/threonine protein kinase.	Protein kinase domain-containing protein.	0.492
G3NVA2_GASAC	G3PGA2_GASAC	ENSGACP00000009271	ENSGACP00000016626	TAN domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.492
G3NVA2_GASAC	G3PN13_GASAC	ENSGACP00000009271	ENSGACP00000018996	TAN domain-containing protein.	Uncharacterized protein.	0.514
G3NVA2_GASAC	G3Q4Y9_GASAC	ENSGACP00000009271	ENSGACP00000024943	TAN domain-containing protein.	Protein kinase domain-containing protein.	0.492
G3PGA2_GASAC	G3NV93_GASAC	ENSGACP00000016626	ENSGACP00000009262	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase.	0.492
G3PGA2_GASAC	G3NVA2_GASAC	ENSGACP00000016626	ENSGACP00000009271	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	TAN domain-containing protein.	0.492
G3PGA2_GASAC	G3PN13_GASAC	ENSGACP00000016626	ENSGACP00000018996	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.976
G3PGA2_GASAC	G3Q4Y9_GASAC	ENSGACP00000016626	ENSGACP00000024943	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.840
G3PN13_GASAC	G3NV93_GASAC	ENSGACP00000018996	ENSGACP00000009262	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.514
G3PN13_GASAC	G3NVA2_GASAC	ENSGACP00000018996	ENSGACP00000009271	Uncharacterized protein.	TAN domain-containing protein.	0.514
G3PN13_GASAC	G3PGA2_GASAC	ENSGACP00000018996	ENSGACP00000016626	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.976
G3PN13_GASAC	G3Q4Y9_GASAC	ENSGACP00000018996	ENSGACP00000024943	Uncharacterized protein.	Protein kinase domain-containing protein.	0.978
G3Q4Y9_GASAC	G3NV93_GASAC	ENSGACP00000024943	ENSGACP00000009262	Protein kinase domain-containing protein.	Non-specific serine/threonine protein kinase.	0.492
G3Q4Y9_GASAC	G3NVA2_GASAC	ENSGACP00000024943	ENSGACP00000009271	Protein kinase domain-containing protein.	TAN domain-containing protein.	0.492
G3Q4Y9_GASAC	G3PGA2_GASAC	ENSGACP00000024943	ENSGACP00000016626	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.840
G3Q4Y9_GASAC	G3PN13_GASAC	ENSGACP00000024943	ENSGACP00000018996	Protein kinase domain-containing protein.	Uncharacterized protein.	0.978
G3Q958_GASAC	SRF	ENSGACP00000026422	ENSGACP00000004953	MADS-box domain-containing protein.	Serum response factor.	0.847
SRF	G3Q958_GASAC	ENSGACP00000004953	ENSGACP00000026422	Serum response factor.	MADS-box domain-containing protein.	0.847