(19 nodes) Brain morphogenesis network (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3Q1L6_GASAC	Catenin (cadherin-associated protein), alpha 2. (905 aa)
	G3Q821_GASAC	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (721 aa)
	G3NVE5_GASAC	FA complementation group C. (443 aa)
	ZNF335	Zinc finger protein 335. (1264 aa)
	G3P301_GASAC	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (579 aa)
	G3P7I9_GASAC	Bardet-Biedl syndrome 1. (581 aa)
	G3PGW2_GASAC	CDP-L-ribitol pyrophosphorylase A. (287 aa)
	G3PMJ1_GASAC	GS homeobox 2. (237 aa)
	G3PRP1_GASAC	Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family. (486 aa)
	G3PTS4_GASAC	Laminin, gamma 3. (1599 aa)
	G3PXZ6_GASAC	Bardet-Biedl syndrome 4. (521 aa)
	G3Q378_GASAC	Catenin (cadherin-associated protein), alpha 1. (911 aa)
	G3N781_GASAC	FA complementation group D2. (1436 aa)
	G3N7R1_GASAC	Uncharacterized protein. (365 aa)
	G3NHB3_GASAC	Homeobox domain-containing protein. (169 aa)
	G3NKQ2_GASAC	McKusick-Kaufman syndrome. (568 aa)
	G3NMM2_GASAC	Neurofibromin 1b. (2449 aa)
	G3NQY5_GASAC	Ubiquitin carboxyl-terminal hydrolase. (329 aa)
	G3NS78_GASAC	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (618 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N781_GASAC	G3NVE5_GASAC	ENSGACP00000001158	ENSGACP00000009314	FA complementation group D2.	FA complementation group C.	0.992
G3NKQ2_GASAC	G3P7I9_GASAC	ENSGACP00000005915	ENSGACP00000013563	McKusick-Kaufman syndrome.	Bardet-Biedl syndrome 1.	0.489
G3NMM2_GASAC	G3PXZ6_GASAC	ENSGACP00000006585	ENSGACP00000022485	Neurofibromin 1b.	Bardet-Biedl syndrome 4.	0.526
G3NQY5_GASAC	G3PXZ6_GASAC	ENSGACP00000007751	ENSGACP00000022485	Ubiquitin carboxyl-terminal hydrolase.	Bardet-Biedl syndrome 4.	0.407
G3NVE5_GASAC	G3N781_GASAC	ENSGACP00000009314	ENSGACP00000001158	FA complementation group C.	FA complementation group D2.	0.992
G3P7I9_GASAC	G3NKQ2_GASAC	ENSGACP00000013563	ENSGACP00000005915	Bardet-Biedl syndrome 1.	McKusick-Kaufman syndrome.	0.489
G3P7I9_GASAC	G3PGW2_GASAC	ENSGACP00000013563	ENSGACP00000016837	Bardet-Biedl syndrome 1.	CDP-L-ribitol pyrophosphorylase A.	0.432
G3P7I9_GASAC	G3PXZ6_GASAC	ENSGACP00000013563	ENSGACP00000022485	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 4.	0.995
G3P7I9_GASAC	G3Q821_GASAC	ENSGACP00000013563	ENSGACP00000026035	Bardet-Biedl syndrome 1.	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	0.830
G3PGW2_GASAC	G3P7I9_GASAC	ENSGACP00000016837	ENSGACP00000013563	CDP-L-ribitol pyrophosphorylase A.	Bardet-Biedl syndrome 1.	0.432
G3PXZ6_GASAC	G3NMM2_GASAC	ENSGACP00000022485	ENSGACP00000006585	Bardet-Biedl syndrome 4.	Neurofibromin 1b.	0.526
G3PXZ6_GASAC	G3NQY5_GASAC	ENSGACP00000022485	ENSGACP00000007751	Bardet-Biedl syndrome 4.	Ubiquitin carboxyl-terminal hydrolase.	0.407
G3PXZ6_GASAC	G3P7I9_GASAC	ENSGACP00000022485	ENSGACP00000013563	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 1.	0.995
G3PXZ6_GASAC	G3Q821_GASAC	ENSGACP00000022485	ENSGACP00000026035	Bardet-Biedl syndrome 4.	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	0.726
G3Q821_GASAC	G3P7I9_GASAC	ENSGACP00000026035	ENSGACP00000013563	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	Bardet-Biedl syndrome 1.	0.830
G3Q821_GASAC	G3PXZ6_GASAC	ENSGACP00000026035	ENSGACP00000022485	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	Bardet-Biedl syndrome 4.	0.726