STRINGSTRING
G3PDK1_GASAC G3PDK1_GASAC G3PCH6_GASAC G3PCH6_GASAC G3NMP8_GASAC G3NMP8_GASAC G3QAL6_GASAC G3QAL6_GASAC G3Q9D2_GASAC G3Q9D2_GASAC G3Q1S0_GASAC G3Q1S0_GASAC G3PXC1_GASAC G3PXC1_GASAC G3PZX4_GASAC G3PZX4_GASAC G3Q1K0_GASAC G3Q1K0_GASAC G3PA33_GASAC G3PA33_GASAC SNRPD1 SNRPD1 G3NP39_GASAC G3NP39_GASAC G3NQ98_GASAC G3NQ98_GASAC G3NU46_GASAC G3NU46_GASAC G3NVX4_GASAC G3NVX4_GASAC G3NWI0_GASAC G3NWI0_GASAC G3P8D4_GASAC G3P8D4_GASAC G3P6H9_GASAC G3P6H9_GASAC G3P3L5_GASAC G3P3L5_GASAC G3P105_GASAC G3P105_GASAC G3PLX6_GASAC G3PLX6_GASAC G3PI77_GASAC G3PI77_GASAC G3N9G4_GASAC G3N9G4_GASAC G3NBJ7_GASAC G3NBJ7_GASAC G3NG36_GASAC G3NG36_GASAC G3NHV3_GASAC G3NHV3_GASAC G3NHW9_GASAC G3NHW9_GASAC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
G3PDK1_GASACCrooked neck pre-mRNA splicing factor 1. (750 aa)
G3PCH6_GASACCell division cycle 40 homolog (S. cerevisiae). (583 aa)
G3NMP8_GASACBCAS2 pre-mRNA processing factor. (225 aa)
G3QAL6_GASACCWC15 spliceosome associated protein homolog. (236 aa)
G3Q9D2_GASACSmall nuclear ribonucleoprotein polypeptide F. (85 aa)
G3Q1S0_GASACRNA binding motif protein 22. (427 aa)
G3PXC1_GASACPleiotropic regulator 1. (513 aa)
G3PZX4_GASACSmall nuclear ribonucleoprotein Sm D3. (128 aa)
G3Q1K0_GASACPre-mRNA processing factor 19. (505 aa)
G3PA33_GASACSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
G3NP39_GASACSNW domain containing 1. (534 aa)
G3NQ98_GASACSmall nuclear ribonucleoprotein 40 (U5). (377 aa)
G3NU46_GASACSmall nuclear ribonucleoprotein Sm D2. (118 aa)
G3NVX4_GASACPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (302 aa)
G3NWI0_GASACSYF2 pre-mRNA-splicing factor. (239 aa)
G3P8D4_GASACAquarius intron-binding spliceosomal factor. (1473 aa)
G3P6H9_GASACXPA binding protein 2. (849 aa)
G3P3L5_GASACElongation factor Tu GTP binding domain containing 2. (971 aa)
G3P105_GASACPre-mRNA processing factor 8. (2344 aa)
G3PLX6_GASACSmall nuclear ribonucleoprotein polypeptide A. (294 aa)
G3PI77_GASACDEAH (Asp-Glu-Ala-His) box polypeptide 34. (1129 aa)
G3N9G4_GASACPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
G3NBJ7_GASACCWC22 spliceosome associated protein homolog. (824 aa)
G3NG36_GASACSmall nuclear ribonucleoprotein-associated protein. (238 aa)
G3NHV3_GASACDEAH (Asp-Glu-Ala-His) box polypeptide 8. (1163 aa)
G3NHW9_GASACDEAH (Asp-Glu-Ala-His) box polypeptide 8. (1198 aa)
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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