(20 nodes) Cellular response to virus network (Gasterosteus aculeatus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	G3P388_GASAC	Prohibitin. (280 aa)
	G3NY43_GASAC	LSM14A mRNA processing body assembly factor a. (477 aa)
	CLPB	ClpB homolog, mitochondrial AAA ATPase chaperonin. (685 aa)
	WDFY4	WDFY family member 4. (3110 aa)
	LSM14A	LSM14A mRNA processing body assembly factor. (457 aa)
	G3PNV7_GASAC	Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1863 aa)
	G3Q464_GASAC	Transmembrane protein 173. (390 aa)
	G3NYV6_GASAC	Interferon regulatory factor 3. (456 aa)
	G3P0I5_GASAC	Gasdermin Eb. (465 aa)
	G3P1S9_GASAC	DEXH (Asp-Glu-X-His) box polypeptide 58. (681 aa)
	G3NW35_GASAC	Gasdermin domain-containing protein. (147 aa)
	G3PDZ1_GASAC	Adenosine deaminase RNA specific. (1260 aa)
	G3PH53_GASAC	Transforming growth factor beta; Belongs to the TGF-beta family. (395 aa)
	G3PL24_GASAC	Zinc finger CCCH-type containing 12A. (578 aa)
	G3NPR2_GASAC	Interferon induced with helicase C domain 1. (1008 aa)
	G3NCJ5_GASAC	Si:dkey-206d17.12. (543 aa)
	G3N771_GASAC	Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (512 aa)
	G3PLD1_GASAC	Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (578 aa)
	G3PM69_GASAC	BCL2 associated X, apoptosis regulator a. (192 aa)
	G3PMQ6_GASAC	C-C motif chemokine. (111 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLPB	G3P388_GASAC	ENSGACP00000010316	ENSGACP00000012061	ClpB homolog, mitochondrial AAA ATPase chaperonin.	Prohibitin.	0.521
G3NPR2_GASAC	G3NYV6_GASAC	ENSGACP00000007327	ENSGACP00000010527	Interferon induced with helicase C domain 1.	Interferon regulatory factor 3.	0.820
G3NPR2_GASAC	G3P1S9_GASAC	ENSGACP00000007327	ENSGACP00000011552	Interferon induced with helicase C domain 1.	DEXH (Asp-Glu-X-His) box polypeptide 58.	0.974
G3NPR2_GASAC	G3PDZ1_GASAC	ENSGACP00000007327	ENSGACP00000015815	Interferon induced with helicase C domain 1.	Adenosine deaminase RNA specific.	0.539
G3NPR2_GASAC	G3Q464_GASAC	ENSGACP00000007327	ENSGACP00000024668	Interferon induced with helicase C domain 1.	Transmembrane protein 173.	0.495
G3NPR2_GASAC	WDFY4	ENSGACP00000007327	ENSGACP00000009302	Interferon induced with helicase C domain 1.	WDFY family member 4.	0.530
G3NYV6_GASAC	G3NPR2_GASAC	ENSGACP00000010527	ENSGACP00000007327	Interferon regulatory factor 3.	Interferon induced with helicase C domain 1.	0.820
G3NYV6_GASAC	G3P1S9_GASAC	ENSGACP00000010527	ENSGACP00000011552	Interferon regulatory factor 3.	DEXH (Asp-Glu-X-His) box polypeptide 58.	0.770
G3NYV6_GASAC	G3PLD1_GASAC	ENSGACP00000010527	ENSGACP00000018412	Interferon regulatory factor 3.	Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).	0.505
G3NYV6_GASAC	G3PM69_GASAC	ENSGACP00000010527	ENSGACP00000018700	Interferon regulatory factor 3.	BCL2 associated X, apoptosis regulator a.	0.545
G3NYV6_GASAC	G3Q464_GASAC	ENSGACP00000010527	ENSGACP00000024668	Interferon regulatory factor 3.	Transmembrane protein 173.	0.983
G3P1S9_GASAC	G3NPR2_GASAC	ENSGACP00000011552	ENSGACP00000007327	DEXH (Asp-Glu-X-His) box polypeptide 58.	Interferon induced with helicase C domain 1.	0.974
G3P1S9_GASAC	G3NYV6_GASAC	ENSGACP00000011552	ENSGACP00000010527	DEXH (Asp-Glu-X-His) box polypeptide 58.	Interferon regulatory factor 3.	0.770
G3P1S9_GASAC	G3PDZ1_GASAC	ENSGACP00000011552	ENSGACP00000015815	DEXH (Asp-Glu-X-His) box polypeptide 58.	Adenosine deaminase RNA specific.	0.405
G3P1S9_GASAC	G3Q464_GASAC	ENSGACP00000011552	ENSGACP00000024668	DEXH (Asp-Glu-X-His) box polypeptide 58.	Transmembrane protein 173.	0.499
G3P1S9_GASAC	WDFY4	ENSGACP00000011552	ENSGACP00000009302	DEXH (Asp-Glu-X-His) box polypeptide 58.	WDFY family member 4.	0.527
G3P388_GASAC	CLPB	ENSGACP00000012061	ENSGACP00000010316	Prohibitin.	ClpB homolog, mitochondrial AAA ATPase chaperonin.	0.521
G3P388_GASAC	G3PLD1_GASAC	ENSGACP00000012061	ENSGACP00000018412	Prohibitin.	Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).	0.510
G3PDZ1_GASAC	G3NPR2_GASAC	ENSGACP00000015815	ENSGACP00000007327	Adenosine deaminase RNA specific.	Interferon induced with helicase C domain 1.	0.539
G3PDZ1_GASAC	G3P1S9_GASAC	ENSGACP00000015815	ENSGACP00000011552	Adenosine deaminase RNA specific.	DEXH (Asp-Glu-X-His) box polypeptide 58.	0.405