11 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3PK84_GASAC	CD2 (cytoplasmic tail) binding protein 2. (347 aa)
	G3NF69_GASAC	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family. (791 aa)
	G3NG36_GASAC	Small nuclear ribonucleoprotein-associated protein. (238 aa)
	SNRPD1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
	G3NU46_GASAC	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	G3P0T9_GASAC	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
	G3P105_GASAC	Pre-mRNA processing factor 8. (2344 aa)
	G3PC73_GASAC	Small nuclear ribonucleoprotein 200 (U5). (2147 aa)
	G3PF52_GASAC	PRP18 pre-mRNA processing factor 18 homolog (yeast). (341 aa)
	G3PIM5_GASAC	Small nuclear ribonucleoprotein polypeptide G. (43 aa)
	G3PZX4_GASAC	Small nuclear ribonucleoprotein Sm D3. (128 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NF69_GASAC	G3NG36_GASAC	ENSGACP00000003970	ENSGACP00000004291	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein-associated protein.	0.969
G3NF69_GASAC	G3NU46_GASAC	ENSGACP00000003970	ENSGACP00000008864	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein Sm D2.	0.990
G3NF69_GASAC	G3P0T9_GASAC	ENSGACP00000003970	ENSGACP00000011212	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.997
G3NF69_GASAC	G3P105_GASAC	ENSGACP00000003970	ENSGACP00000011278	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.	Pre-mRNA processing factor 8.	0.999
G3NF69_GASAC	G3PC73_GASAC	ENSGACP00000003970	ENSGACP00000015197	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein 200 (U5).	0.992
G3NF69_GASAC	G3PF52_GASAC	ENSGACP00000003970	ENSGACP00000016226	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.	PRP18 pre-mRNA processing factor 18 homolog (yeast).	0.712
G3NF69_GASAC	G3PIM5_GASAC	ENSGACP00000003970	ENSGACP00000017453	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein polypeptide G.	0.986
G3NF69_GASAC	G3PK84_GASAC	ENSGACP00000003970	ENSGACP00000018014	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.	CD2 (cytoplasmic tail) binding protein 2.	0.957
G3NF69_GASAC	G3PZX4_GASAC	ENSGACP00000003970	ENSGACP00000023164	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein Sm D3.	0.985
G3NF69_GASAC	SNRPD1	ENSGACP00000003970	ENSGACP00000006899	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.987
G3NG36_GASAC	G3NF69_GASAC	ENSGACP00000004291	ENSGACP00000003970	Small nuclear ribonucleoprotein-associated protein.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.	0.969
G3NG36_GASAC	G3NU46_GASAC	ENSGACP00000004291	ENSGACP00000008864	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D2.	0.996
G3NG36_GASAC	G3P0T9_GASAC	ENSGACP00000004291	ENSGACP00000011212	Small nuclear ribonucleoprotein-associated protein.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.974
G3NG36_GASAC	G3P105_GASAC	ENSGACP00000004291	ENSGACP00000011278	Small nuclear ribonucleoprotein-associated protein.	Pre-mRNA processing factor 8.	0.980
G3NG36_GASAC	G3PC73_GASAC	ENSGACP00000004291	ENSGACP00000015197	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein 200 (U5).	0.981
G3NG36_GASAC	G3PF52_GASAC	ENSGACP00000004291	ENSGACP00000016226	Small nuclear ribonucleoprotein-associated protein.	PRP18 pre-mRNA processing factor 18 homolog (yeast).	0.698
G3NG36_GASAC	G3PIM5_GASAC	ENSGACP00000004291	ENSGACP00000017453	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein polypeptide G.	0.994
G3NG36_GASAC	G3PK84_GASAC	ENSGACP00000004291	ENSGACP00000018014	Small nuclear ribonucleoprotein-associated protein.	CD2 (cytoplasmic tail) binding protein 2.	0.890
G3NG36_GASAC	G3PZX4_GASAC	ENSGACP00000004291	ENSGACP00000023164	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D3.	0.997
G3NG36_GASAC	SNRPD1	ENSGACP00000004291	ENSGACP00000006899	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.995