(16 nodes) Cytosolic large ribosomal subunit network (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3NJ11_GASAC	Ribosomal protein L6. (272 aa)
	RPL19-2	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
	G3NYZ5_GASAC	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	G3NVH0_GASAC	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (77 aa)
	G3PUN8_GASAC	Ribosomal protein L9. (192 aa)
	G3PQX4_GASAC	Ribosomal protein L31. (124 aa)
	G3NHE9_GASAC	Ribosomal protein L30. (116 aa)
	G3NIT7_GASAC	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
	G3Q3C4_GASAC	Ribosomal protein L26. (145 aa)
	G3NLJ0_GASAC	Ribosomal protein L35a. (110 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
	G3NQ42_GASAC	Zinc finger, CCHC domain containing 17. (256 aa)
	G3NMQ4_GASAC	Ribosomal protein L4. (383 aa)
	G3N640_GASAC	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	G3NDY7_GASAC	Uncharacterized protein. (135 aa)
	G3PI88_GASAC	Ribosomal protein L10. (216 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N640_GASAC	G3NDY7_GASAC	ENSGACP00000000764	ENSGACP00000003538	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	Uncharacterized protein.	0.999
G3N640_GASAC	G3NHE9_GASAC	ENSGACP00000000764	ENSGACP00000004757	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L30.	0.999
G3N640_GASAC	G3NIT7_GASAC	ENSGACP00000000764	ENSGACP00000005247	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.999
G3N640_GASAC	G3NJ11_GASAC	ENSGACP00000000764	ENSGACP00000005321	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L6.	0.999
G3N640_GASAC	G3NLJ0_GASAC	ENSGACP00000000764	ENSGACP00000006203	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L35a.	0.999
G3N640_GASAC	G3NMQ4_GASAC	ENSGACP00000000764	ENSGACP00000006617	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L4.	0.999
G3N640_GASAC	G3NVH0_GASAC	ENSGACP00000000764	ENSGACP00000009334	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
G3N640_GASAC	G3NYZ5_GASAC	ENSGACP00000000764	ENSGACP00000010566	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
G3N640_GASAC	G3PI88_GASAC	ENSGACP00000000764	ENSGACP00000017309	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L10.	0.999
G3N640_GASAC	G3PQX4_GASAC	ENSGACP00000000764	ENSGACP00000020009	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L31.	0.999
G3N640_GASAC	G3PUN8_GASAC	ENSGACP00000000764	ENSGACP00000021321	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L9.	0.999
G3N640_GASAC	G3Q3C4_GASAC	ENSGACP00000000764	ENSGACP00000024376	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L26.	0.999
G3N640_GASAC	RPL19	ENSGACP00000000764	ENSGACP00000008054	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.997
G3N640_GASAC	RPL19-2	ENSGACP00000000764	ENSGACP00000012251	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.997
G3NDY7_GASAC	G3N640_GASAC	ENSGACP00000003538	ENSGACP00000000764	Uncharacterized protein.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
G3NDY7_GASAC	G3NHE9_GASAC	ENSGACP00000003538	ENSGACP00000004757	Uncharacterized protein.	Ribosomal protein L30.	0.999
G3NDY7_GASAC	G3NIT7_GASAC	ENSGACP00000003538	ENSGACP00000005247	Uncharacterized protein.	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.999
G3NDY7_GASAC	G3NJ11_GASAC	ENSGACP00000003538	ENSGACP00000005321	Uncharacterized protein.	Ribosomal protein L6.	0.999
G3NDY7_GASAC	G3NLJ0_GASAC	ENSGACP00000003538	ENSGACP00000006203	Uncharacterized protein.	Ribosomal protein L35a.	0.999
G3NDY7_GASAC	G3NMQ4_GASAC	ENSGACP00000003538	ENSGACP00000006617	Uncharacterized protein.	Ribosomal protein L4.	0.999