(111 nodes) Ribosomal subunit network (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3NMQ4_GASAC	Ribosomal protein L4. (383 aa)
	G3NMM0_GASAC	Mitochondrial ribosomal protein L14. (148 aa)
	G3NMD7_GASAC	Mitochondrial ribosomal protein S26. (207 aa)
	G3NLJ0_GASAC	Ribosomal protein L35a. (110 aa)
	G3NK58_GASAC	Mitochondrial ribosomal protein L15. (285 aa)
	G3NJN3_GASAC	Mitochondrial ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family. (216 aa)
	G3NJ92_GASAC	Mitochondrial ribosomal protein L2. (297 aa)
	G3NIT7_GASAC	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
	G3NIR8_GASAC	Uncharacterized protein. (72 aa)
	G3NIG2_GASAC	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	G3NI87_GASAC	Mitochondrial ribosomal protein L10. (252 aa)
	G3NHW8_GASAC	Mitochondrial ribosomal protein S35. (335 aa)
	G3NHG6_GASAC	Mitochondrial ribosomal protein L41. (135 aa)
	G3NHE9_GASAC	Ribosomal protein L30. (116 aa)
	G3NH71_GASAC	Ribosomal protein L35. (123 aa)
	G3NGX6_GASAC	Mitochondrial ribosomal protein L43. (156 aa)
	G3NGV9_GASAC	Ribosomal protein S19. (154 aa)
	G3NGR2_GASAC	Mitochondrial ribosomal protein L53. (108 aa)
	G3NG52_GASAC	Mitochondrial ribosomal protein S21. (87 aa)
	G3NFX5_GASAC	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (169 aa)
	MRPS12	Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (150 aa)
	G3NEX5_GASAC	Mitochondrial ribosomal protein S25. (168 aa)
	G3NER7_GASAC	Uncharacterized protein. (68 aa)
	G3NEK4_GASAC	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (208 aa)
	G3NDY7_GASAC	Uncharacterized protein. (135 aa)
	G3NBS4_GASAC	Zgc:171480. (92 aa)
	RPS20	Ribosomal protein S20. (125 aa)
	G3NAW9_GASAC	Mitochondrial ribosomal protein S24. (165 aa)
	G3NA94_GASAC	Mitochondrial ribosomal protein S16. (137 aa)
	G3N902_GASAC	Mitochondrial ribosomal protein S18B. (243 aa)
	G3N840_GASAC	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)
	G3N6N0_GASAC	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	G3N6C1_GASAC	Mitochondrial ribosomal protein L45. (315 aa)
	G3N640_GASAC	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	G3N4R0_GASAC	Mitochondrial ribosomal protein S5. (296 aa)
	G3NJ11_GASAC	Ribosomal protein L6. (272 aa)
	G3QCB8_GASAC	Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family. (211 aa)
	G3QB32_GASAC	Mitochondrial ribosomal protein S17. (140 aa)
	G3QAU0_GASAC	Uncharacterized protein. (151 aa)
	G3Q972_GASAC	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (158 aa)
	G3Q8F8_GASAC	Mitochondrial ribosomal protein L4. (303 aa)
	G3Q8C6_GASAC	Uncharacterized protein. (204 aa)
	G3Q672_GASAC	Mitochondrial ribosomal protein L52. (127 aa)
	G3Q533_GASAC	Mitochondrial ribosomal protein L48. (207 aa)
	G3Q4R4_GASAC	Mitochondrial ribosomal protein L42. (97 aa)
	G3Q3C4_GASAC	Ribosomal protein L26. (145 aa)
	G3Q1I6_GASAC	Mitochondrial ribosomal protein L18. (171 aa)
	G3Q163_GASAC	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	G3PZQ5_GASAC	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	RPS3A	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (267 aa)
	G3PY64_GASAC	Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (194 aa)
	G3PY18_GASAC	Ribosomal protein S17. (140 aa)
	DHX29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1376 aa)
	G3PUN8_GASAC	Ribosomal protein L9. (192 aa)
	G3PTR5_GASAC	Mitochondrial ribosomal protein S2. (257 aa)
	G3PSE7_GASAC	Ribosomal protein S28. (69 aa)
	G3PSC5_GASAC	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (144 aa)
	G3PRM4_GASAC	Mitochondrial ribosomal protein L16. (258 aa)
	G3PR63_GASAC	Mitochondrial ribosomal protein L27. (147 aa)
	G3PQX4_GASAC	Ribosomal protein L31. (124 aa)
	G3PQN4_GASAC	Mitochondrial ribosomal protein L39. (308 aa)
	G3PQF4_GASAC	Uncharacterized protein. (198 aa)
	G3PPJ9_GASAC	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (134 aa)
	G3PPJ5_GASAC	Mitochondrial ribosomal protein L46. (278 aa)
	G3PP19_GASAC	Mitochondrial ribosomal protein L37. (429 aa)
	G3PM62_GASAC	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (162 aa)
	G3PKT4_GASAC	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. (181 aa)
	G3PKT2_GASAC	Mitochondrial ribosomal protein S30. (439 aa)
	G3PKP1_GASAC	Mitochondrial ribosomal protein S14. (130 aa)
	G3PJ89_GASAC	Mitochondrial ribosomal protein S18A. (204 aa)
	G3PID0_GASAC	Uncharacterized protein. (168 aa)
	MRPL49	Mitochondrial ribosomal protein L49. (143 aa)
	G3PI88_GASAC	Ribosomal protein L10. (216 aa)
	G3PHH9_GASAC	Mitochondrial ribosomal protein L33. (65 aa)
	G3PHB9_GASAC	Ribosomal protein S29. (78 aa)
	G3PH76_GASAC	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (145 aa)
	G3PF46_GASAC	Mitochondrial ribosomal protein S7. (211 aa)
	G3PDW0_GASAC	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
	G3PDV0_GASAC	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	G3PDM5_GASAC	Death associated protein 3. (397 aa)
	G3PCG6_GASAC	Ribosomal protein S27a. (158 aa)
	G3PBX3_GASAC	Mitochondrial ribosomal protein S33. (106 aa)
	G3PBE9_GASAC	40S ribosomal protein S27. (85 aa)
	G3PAU9_GASAC	Mitochondrial ribosomal protein L23. (154 aa)
	G3P8K9_GASAC	Mitochondrial ribosomal protein L12. (200 aa)
	G3P787_GASAC	Mitochondrial ribosomal protein L51. (131 aa)
	G3P6H3_GASAC	Mitochondrial ribosomal protein L47. (236 aa)
	G3P5V0_GASAC	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	G3P561_GASAC	Mitochondrial ribosomal protein L28. (260 aa)
	RPL19-2	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
	G3P3P0_GASAC	Mitochondrial ribosomal protein L19. (286 aa)
	G3P265_GASAC	Mitochondrial ribosomal protein S10. (201 aa)
	G3P1R7_GASAC	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (137 aa)
	G3P1N3_GASAC	Coiled-coil domain containing 32. (196 aa)
	G3P003_GASAC	Mitochondrial ribosomal protein L35. (185 aa)
	G3NZP5_GASAC	MPV17 mitochondrial membrane protein-like 2; Belongs to the peroxisomal membrane protein PXMP2/4 family. (200 aa)
	RPS17	Ribosomal protein S17. (140 aa)
	G3NYZ5_GASAC	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	G3NVI0_GASAC	Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. (146 aa)
	G3NVH0_GASAC	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (77 aa)
	G3NUM7_GASAC	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (125 aa)
	G3NU97_GASAC	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	G3NTK7_GASAC	Mitochondrial ribosomal protein S27. (416 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
	RPSA	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (294 aa)
	G3NRJ4_GASAC	Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (341 aa)
	G3NQH0_GASAC	Mitochondrial ribosomal protein L32. (191 aa)
	G3NQ42_GASAC	Zinc finger, CCHC domain containing 17. (256 aa)
	G3NQ24_GASAC	Mitochondrial ribosomal protein S22. (337 aa)
	G3NN94_GASAC	Mitochondrial ribosomal protein L38. (261 aa)
	G3NMS2_GASAC	Uncharacterized protein. (109 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHX29	G3N4R0_GASAC	ENSGACP00000021447	ENSGACP00000000280	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Mitochondrial ribosomal protein S5.	0.651
DHX29	G3NEK4_GASAC	ENSGACP00000021447	ENSGACP00000003755	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.646
DHX29	G3NGV9_GASAC	ENSGACP00000021447	ENSGACP00000004566	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S19.	0.502
DHX29	G3NIG2_GASAC	ENSGACP00000021447	ENSGACP00000005122	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	0.613
DHX29	G3NMQ4_GASAC	ENSGACP00000021447	ENSGACP00000006617	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein L4.	0.521
DHX29	G3NU97_GASAC	ENSGACP00000021447	ENSGACP00000008915	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.617
DHX29	G3P1R7_GASAC	ENSGACP00000021447	ENSGACP00000011540	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.853
DHX29	G3P5V0_GASAC	ENSGACP00000021447	ENSGACP00000012973	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.524
DHX29	G3PBE9_GASAC	ENSGACP00000021447	ENSGACP00000014923	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S27.	0.603
DHX29	G3PCG6_GASAC	ENSGACP00000021447	ENSGACP00000015290	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S27a.	0.641
DHX29	G3PDV0_GASAC	ENSGACP00000021447	ENSGACP00000015774	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.659
DHX29	G3PDW0_GASAC	ENSGACP00000021447	ENSGACP00000015779	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.762
DHX29	G3PF46_GASAC	ENSGACP00000021447	ENSGACP00000016220	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Mitochondrial ribosomal protein S7.	0.625
DHX29	G3PH76_GASAC	ENSGACP00000021447	ENSGACP00000016951	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.546
DHX29	G3PKT4_GASAC	ENSGACP00000021447	ENSGACP00000018214	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.617
DHX29	G3PM62_GASAC	ENSGACP00000021447	ENSGACP00000018693	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.685
DHX29	G3PPJ9_GASAC	ENSGACP00000021447	ENSGACP00000019533	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.657
DHX29	G3PSE7_GASAC	ENSGACP00000021447	ENSGACP00000020533	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Ribosomal protein S28.	0.673
DHX29	G3Q163_GASAC	ENSGACP00000021447	ENSGACP00000023611	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.767
DHX29	G3Q8F8_GASAC	ENSGACP00000021447	ENSGACP00000026172	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	Mitochondrial ribosomal protein L4.	0.521