(10 nodes) Zinc-binding ribosomal protein network (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3PCG6_GASAC	Ribosomal protein S27a. (158 aa)
	G3PBE9_GASAC	40S ribosomal protein S27. (85 aa)
	G3NZ68_GASAC	Ubiquitin A-52 residue ribosomal protein fusion product 1. (130 aa)
	G3NQH0_GASAC	Mitochondrial ribosomal protein L32. (191 aa)
	G3NGD2_GASAC	40S ribosomal protein S27. (84 aa)
	RPL37A	Ribosomal protein L37a. (92 aa)
	G3PDW9_GASAC	40S ribosomal protein S27. (84 aa)
	G3PUI3_GASAC	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	G3PHH9_GASAC	Mitochondrial ribosomal protein L33. (65 aa)
	G3PZQ5_GASAC	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NGD2_GASAC	G3NZ68_GASAC	ENSGACP00000004388	ENSGACP00000010640	40S ribosomal protein S27.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.996
G3NGD2_GASAC	G3PBE9_GASAC	ENSGACP00000004388	ENSGACP00000014923	40S ribosomal protein S27.	40S ribosomal protein S27.	0.841
G3NGD2_GASAC	G3PCG6_GASAC	ENSGACP00000004388	ENSGACP00000015290	40S ribosomal protein S27.	Ribosomal protein S27a.	0.995
G3NGD2_GASAC	G3PUI3_GASAC	ENSGACP00000004388	ENSGACP00000021270	40S ribosomal protein S27.	Ribosomal protein L37; Binds to the 23S rRNA.	0.988
G3NGD2_GASAC	G3PZQ5_GASAC	ENSGACP00000004388	ENSGACP00000023095	40S ribosomal protein S27.	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	0.988
G3NGD2_GASAC	RPL37A	ENSGACP00000004388	ENSGACP00000016501	40S ribosomal protein S27.	Ribosomal protein L37a.	0.987
G3NQH0_GASAC	G3PHH9_GASAC	ENSGACP00000007586	ENSGACP00000017054	Mitochondrial ribosomal protein L32.	Mitochondrial ribosomal protein L33.	0.999
G3NZ68_GASAC	G3NGD2_GASAC	ENSGACP00000010640	ENSGACP00000004388	Ubiquitin A-52 residue ribosomal protein fusion product 1.	40S ribosomal protein S27.	0.996
G3NZ68_GASAC	G3PBE9_GASAC	ENSGACP00000010640	ENSGACP00000014923	Ubiquitin A-52 residue ribosomal protein fusion product 1.	40S ribosomal protein S27.	0.993
G3NZ68_GASAC	G3PCG6_GASAC	ENSGACP00000010640	ENSGACP00000015290	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ribosomal protein S27a.	0.999
G3NZ68_GASAC	G3PDW9_GASAC	ENSGACP00000010640	ENSGACP00000015793	Ubiquitin A-52 residue ribosomal protein fusion product 1.	40S ribosomal protein S27.	0.996
G3NZ68_GASAC	G3PUI3_GASAC	ENSGACP00000010640	ENSGACP00000021270	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
G3NZ68_GASAC	G3PZQ5_GASAC	ENSGACP00000010640	ENSGACP00000023095	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
G3NZ68_GASAC	RPL37A	ENSGACP00000010640	ENSGACP00000016501	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ribosomal protein L37a.	0.999
G3PBE9_GASAC	G3NGD2_GASAC	ENSGACP00000014923	ENSGACP00000004388	40S ribosomal protein S27.	40S ribosomal protein S27.	0.841
G3PBE9_GASAC	G3NZ68_GASAC	ENSGACP00000014923	ENSGACP00000010640	40S ribosomal protein S27.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.993
G3PBE9_GASAC	G3PCG6_GASAC	ENSGACP00000014923	ENSGACP00000015290	40S ribosomal protein S27.	Ribosomal protein S27a.	0.992
G3PBE9_GASAC	G3PDW9_GASAC	ENSGACP00000014923	ENSGACP00000015793	40S ribosomal protein S27.	40S ribosomal protein S27.	0.841
G3PBE9_GASAC	G3PUI3_GASAC	ENSGACP00000014923	ENSGACP00000021270	40S ribosomal protein S27.	Ribosomal protein L37; Binds to the 23S rRNA.	0.982
G3PBE9_GASAC	G3PZQ5_GASAC	ENSGACP00000014923	ENSGACP00000023095	40S ribosomal protein S27.	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	0.979