STRINGSTRING
CSDE1 CSDE1 G3N424_GASAC G3N424_GASAC G3N487_GASAC G3N487_GASAC G3N587_GASAC G3N587_GASAC G3N6B1_GASAC G3N6B1_GASAC G3NBG2_GASAC G3NBG2_GASAC G3NCF1_GASAC G3NCF1_GASAC MRPS12 MRPS12 G3NHV3_GASAC G3NHV3_GASAC G3NHW9_GASAC G3NHW9_GASAC G3NIG2_GASAC G3NIG2_GASAC G3NJ92_GASAC G3NJ92_GASAC G3NKN1_GASAC G3NKN1_GASAC G3NLF1_GASAC G3NLF1_GASAC G3NNG5_GASAC G3NNG5_GASAC G3NQ42_GASAC G3NQ42_GASAC G3NQM7_GASAC G3NQM7_GASAC G3NQU4_GASAC G3NQU4_GASAC G3NQY4_GASAC G3NQY4_GASAC G3NRM6_GASAC G3NRM6_GASAC G3NT55_GASAC G3NT55_GASAC G3NUG2_GASAC G3NUG2_GASAC G3NV85_GASAC G3NV85_GASAC G3NWB9_GASAC G3NWB9_GASAC CSDC2 CSDC2 G3NXG0_GASAC G3NXG0_GASAC G3NYF2_GASAC G3NYF2_GASAC G3NYR2_GASAC G3NYR2_GASAC G3P095_GASAC G3P095_GASAC G3P140_GASAC G3P140_GASAC G3P1A2_GASAC G3P1A2_GASAC G3P1T0_GASAC G3P1T0_GASAC G3P2V6_GASAC G3P2V6_GASAC G3P3I9_GASAC G3P3I9_GASAC G3P4A7_GASAC G3P4A7_GASAC G3P5Z3_GASAC G3P5Z3_GASAC SRBD1 SRBD1 G3P9V2_GASAC G3P9V2_GASAC PNPT1 PNPT1 G3PAD7_GASAC G3PAD7_GASAC G3PC75_GASAC G3PC75_GASAC G3PCB1_GASAC G3PCB1_GASAC G3PDI3_GASAC G3PDI3_GASAC G3PEK6_GASAC G3PEK6_GASAC G3PEX0_GASAC G3PEX0_GASAC G3PFI7_GASAC G3PFI7_GASAC G3PFN1_GASAC G3PFN1_GASAC G3PGH1_GASAC G3PGH1_GASAC G3PHB2_GASAC G3PHB2_GASAC LIN28A LIN28A G3PLA5_GASAC G3PLA5_GASAC G3PLP7_GASAC G3PLP7_GASAC G3PM28_GASAC G3PM28_GASAC G3PM62_GASAC G3PM62_GASAC G3PSE7_GASAC G3PSE7_GASAC G3PT52_GASAC G3PT52_GASAC G3PUL8_GASAC G3PUL8_GASAC G3PV64_GASAC G3PV64_GASAC G3PV85_GASAC G3PV85_GASAC G3PVC5_GASAC G3PVC5_GASAC MCM7 MCM7 dis3l2 dis3l2 G3PX61_GASAC G3PX61_GASAC G3PZ27_GASAC G3PZ27_GASAC G3PZT1_GASAC G3PZT1_GASAC G3Q0G8_GASAC G3Q0G8_GASAC G3Q0L5_GASAC G3Q0L5_GASAC G3Q1D6_GASAC G3Q1D6_GASAC G3Q2K9_GASAC G3Q2K9_GASAC G3Q492_GASAC G3Q492_GASAC G3Q579_GASAC G3Q579_GASAC G3Q618_GASAC G3Q618_GASAC G3Q6F8_GASAC G3Q6F8_GASAC YBX2 YBX2 G3Q700_GASAC G3Q700_GASAC G3Q9G8_GASAC G3Q9G8_GASAC G3QAF9_GASAC G3QAF9_GASAC G3QB32_GASAC G3QB32_GASAC G3QB56_GASAC G3QB56_GASAC RPA1 RPA1 G3QCE5_GASAC G3QCE5_GASAC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CSDE1Cold shock domain containing E1, RNA-binding. (797 aa)
G3N424_GASACDNA helicase; Belongs to the MCM family. (905 aa)
G3N487_GASACReplication protein A3. (122 aa)
G3N587_GASACtRNA-binding domain-containing protein. (149 aa)
G3N6B1_GASACAsparaginyl-tRNA synthetase. (559 aa)
G3NBG2_GASACRibosomal protein L8. (257 aa)
G3NCF1_GASACNucleic acid binding protein 1a. (216 aa)
MRPS12Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (150 aa)
G3NHV3_GASACDEAH (Asp-Glu-Ala-His) box polypeptide 8. (1163 aa)
G3NHW9_GASACDEAH (Asp-Glu-Ala-His) box polypeptide 8. (1198 aa)
G3NIG2_GASACRibosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
G3NJ92_GASACMitochondrial ribosomal protein L2. (297 aa)
G3NKN1_GASACDNA helicase; Belongs to the MCM family. (814 aa)
G3NLF1_GASACCold shock domain containing C2, RNA binding a. (165 aa)
G3NNG5_GASACProteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (367 aa)
G3NQ42_GASACZinc finger, CCHC domain containing 17. (256 aa)
G3NQM7_GASACProteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (407 aa)
G3NQU4_GASACMinichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family. (652 aa)
G3NQY4_GASACCalcium regulated heat stable protein 1. (148 aa)
G3NRM6_GASACTetratricopeptide repeat domain 14. (442 aa)
G3NT55_GASACY box binding protein 1. (304 aa)
G3NUG2_GASACDNA helicase; Belongs to the MCM family. (737 aa)
G3NV85_GASACProteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (422 aa)
G3NWB9_GASACAspartyl-tRNA synthetase. (535 aa)
CSDC2Cold shock domain containing C2. (159 aa)
G3NXG0_GASACPolymerase (RNA) III (DNA directed) polypeptide H. (214 aa)
G3NYF2_GASACLin-28 homolog A (C. elegans). (168 aa)
G3NYR2_GASACCell division cycle and apoptosis regulator 1. (1172 aa)
G3P095_GASACPolynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (612 aa)
G3P140_GASACTyrosine--tRNA ligase. (531 aa)
G3P1A2_GASACEukaryotic translation initiation factor 2, subunit 1 alpha b. (315 aa)
G3P1T0_GASACProtection of telomeres 1 homolog. (785 aa)
G3P2V6_GASACDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
G3P3I9_GASACMethionine sulfoxide reductase B1b. (466 aa)
G3P4A7_GASACLin-28 homolog B (C. elegans). (236 aa)
G3P5Z3_GASACDIS3 exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (973 aa)
SRBD1S1 RNA binding domain 1. (625 aa)
G3P9V2_GASACReplication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (602 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (772 aa)
G3PAD7_GASACEukaryotic translation initiation factor 5A. (152 aa)
G3PC75_GASACTower domain-containing protein. (851 aa)
G3PCB1_GASACUncharacterized protein. (2525 aa)
G3PDI3_GASACMinichromosome maintenance 8 homologous recombination repair factor; Belongs to the MCM family. (810 aa)
G3PEK6_GASACAsparaginyl-tRNA synthetase 2, mitochondrial. (486 aa)
G3PEX0_GASACUncharacterized protein. (226 aa)
G3PFI7_GASACDNA helicase; Belongs to the MCM family. (821 aa)
G3PFN1_GASACProteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
G3PGH1_GASACEukaryotic translation initiation factor 5A. (176 aa)
G3PHB2_GASACEukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (155 aa)
LIN28ALin-28 homolog A. (203 aa)
G3PLA5_GASACReplication protein A2. (274 aa)
G3PLP7_GASACRecQ mediated genome instability 2. (154 aa)
G3PM28_GASACDNA ligase. (910 aa)
G3PM62_GASACRibosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (162 aa)
G3PSE7_GASACRibosomal protein S28. (69 aa)
G3PT52_GASACLysine--tRNA ligase. (612 aa)
G3PUL8_GASACProteasome 26S subunit, ATPase 3. (444 aa)
G3PV64_GASACRep_fac-A_C domain-containing protein. (172 aa)
G3PV85_GASACCST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (364 aa)
G3PVC5_GASACExosome component 3. (246 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (685 aa)
dis3l2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. (817 aa)
G3PX61_GASACExosome component 2. (295 aa)
G3PZ27_GASACDIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (969 aa)
G3PZT1_GASACAminoacyl tRNA synthetase complex interacting multifunctional protein 1a. (318 aa)
G3Q0G8_GASACDNA ligase. (904 aa)
G3Q0L5_GASACPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
G3Q1D6_GASACDNA helicase; Belongs to the MCM family. (861 aa)
G3Q2K9_GASACProgrammed cell death 11. (1833 aa)
G3Q492_GASACEukaryotic translation initiation factor 1A domain containing. (165 aa)
G3Q579_GASACExosome component 1. (194 aa)
G3Q618_GASACMinichromosome maintenance 10 replication initiation factor. (851 aa)
G3Q6F8_GASACTEN1 subunit of CST complex. (122 aa)
YBX2Y-box binding protein 2. (322 aa)
G3Q700_GASACProteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (440 aa)
G3Q9G8_GASACSingle-stranded DNA binding protein 1. (147 aa)
G3QAF9_GASACRPA1 related single stranded DNA binding protein. (816 aa)
G3QB32_GASACMitochondrial ribosomal protein S17. (140 aa)
G3QB56_GASACTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1720 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (610 aa)
G3QCE5_GASACDNA ligase. (985 aa)
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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