(10 nodes) Proteasome alpha-type subunit network (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PSMA4	Proteasome subunit alpha type. (261 aa)
	G3N556_GASAC	Proteasome subunit alpha type. (241 aa)
	G3NJ18_GASAC	Proteasome subunit alpha type. (255 aa)
	G3NMW7_GASAC	Proteasome subunit alpha type. (248 aa)
	G3NQG7_GASAC	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (226 aa)
	G3NQQ6_GASAC	Proteasome subunit alpha type. (245 aa)
	G3NTT6_GASAC	Proteasome subunit alpha type. (264 aa)
	G3PG43_GASAC	Proteasome subunit alpha type. (228 aa)
	G3PZP3_GASAC	Proteasome subunit alpha type. (261 aa)
	G3PIQ9_GASAC	Proteasome subunit alpha type. (251 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N556_GASAC	G3NJ18_GASAC	ENSGACP00000000426	ENSGACP00000005328	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
G3N556_GASAC	G3NMW7_GASAC	ENSGACP00000000426	ENSGACP00000006680	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.996
G3N556_GASAC	G3NQG7_GASAC	ENSGACP00000000426	ENSGACP00000007583	Proteasome subunit alpha type.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.999
G3N556_GASAC	G3NQQ6_GASAC	ENSGACP00000000426	ENSGACP00000007672	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.996
G3N556_GASAC	G3NTT6_GASAC	ENSGACP00000000426	ENSGACP00000008754	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
G3N556_GASAC	G3PG43_GASAC	ENSGACP00000000426	ENSGACP00000016567	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.996
G3N556_GASAC	G3PIQ9_GASAC	ENSGACP00000000426	ENSGACP00000017488	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
G3N556_GASAC	G3PZP3_GASAC	ENSGACP00000000426	ENSGACP00000023083	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.997
G3N556_GASAC	PSMA4	ENSGACP00000000426	ENSGACP00000009571	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.997
G3NJ18_GASAC	G3N556_GASAC	ENSGACP00000005328	ENSGACP00000000426	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
G3NJ18_GASAC	G3NMW7_GASAC	ENSGACP00000005328	ENSGACP00000006680	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.996
G3NJ18_GASAC	G3NQG7_GASAC	ENSGACP00000005328	ENSGACP00000007583	Proteasome subunit alpha type.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.999
G3NJ18_GASAC	G3NQQ6_GASAC	ENSGACP00000005328	ENSGACP00000007672	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.996
G3NJ18_GASAC	G3NTT6_GASAC	ENSGACP00000005328	ENSGACP00000008754	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
G3NJ18_GASAC	G3PG43_GASAC	ENSGACP00000005328	ENSGACP00000016567	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.996
G3NJ18_GASAC	G3PIQ9_GASAC	ENSGACP00000005328	ENSGACP00000017488	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
G3NJ18_GASAC	G3PZP3_GASAC	ENSGACP00000005328	ENSGACP00000023083	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.998
G3NJ18_GASAC	PSMA4	ENSGACP00000005328	ENSGACP00000009571	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.998
G3NMW7_GASAC	G3N556_GASAC	ENSGACP00000006680	ENSGACP00000000426	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.996
G3NMW7_GASAC	G3NJ18_GASAC	ENSGACP00000006680	ENSGACP00000005328	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.996