15 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3PS27_GASAC	Coagulation factor VIIi. (457 aa)
	G3NM02_GASAC	Uncharacterized protein. (245 aa)
	G3PC41_GASAC	Protein Z, vitamin K-dependent plasma glycoprotein a; Belongs to the peptidase S1 family. (441 aa)
	G3PC60_GASAC	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family. (831 aa)
	G3PRF1_GASAC	Protein S. (678 aa)
	G3PRG3_GASAC	Uncharacterized protein. (664 aa)
	G3PRZ3_GASAC	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family. (618 aa)
	G3PS25_GASAC	Coagulation factor VII. (440 aa)
	G3PS47_GASAC	Coagulation factor X. (498 aa)
	G3PS48_GASAC	Peptidase S1 domain-containing protein. (274 aa)
	G3PT67_GASAC	Uncharacterized protein. (435 aa)
	G3PTS1_GASAC	Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family. (745 aa)
	G3PTX5_GASAC	Gla domain-containing protein. (202 aa)
	G3PYM9_GASAC	Coagulation factor IXa. (494 aa)
	G3QAX5_GASAC	Coagulation factor IXb. (547 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NM02_GASAC	G3PC60_GASAC	ENSGACP00000006365	ENSGACP00000015184	Uncharacterized protein.	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.	0.560
G3NM02_GASAC	G3PRF1_GASAC	ENSGACP00000006365	ENSGACP00000020186	Uncharacterized protein.	Protein S.	0.552
G3NM02_GASAC	G3PRZ3_GASAC	ENSGACP00000006365	ENSGACP00000020379	Uncharacterized protein.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.858
G3NM02_GASAC	G3PS25_GASAC	ENSGACP00000006365	ENSGACP00000020411	Uncharacterized protein.	Coagulation factor VII.	0.451
G3NM02_GASAC	G3PT67_GASAC	ENSGACP00000006365	ENSGACP00000020803	Uncharacterized protein.	Uncharacterized protein.	0.784
G3NM02_GASAC	G3PTS1_GASAC	ENSGACP00000006365	ENSGACP00000021008	Uncharacterized protein.	Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.	0.644
G3PC41_GASAC	G3PC60_GASAC	ENSGACP00000015165	ENSGACP00000015184	Protein Z, vitamin K-dependent plasma glycoprotein a; Belongs to the peptidase S1 family.	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.	0.581
G3PC41_GASAC	G3PRF1_GASAC	ENSGACP00000015165	ENSGACP00000020186	Protein Z, vitamin K-dependent plasma glycoprotein a; Belongs to the peptidase S1 family.	Protein S.	0.520
G3PC41_GASAC	G3PRZ3_GASAC	ENSGACP00000015165	ENSGACP00000020379	Protein Z, vitamin K-dependent plasma glycoprotein a; Belongs to the peptidase S1 family.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.854
G3PC41_GASAC	G3PT67_GASAC	ENSGACP00000015165	ENSGACP00000020803	Protein Z, vitamin K-dependent plasma glycoprotein a; Belongs to the peptidase S1 family.	Uncharacterized protein.	0.621
G3PC41_GASAC	G3PTS1_GASAC	ENSGACP00000015165	ENSGACP00000021008	Protein Z, vitamin K-dependent plasma glycoprotein a; Belongs to the peptidase S1 family.	Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.	0.560
G3PC60_GASAC	G3NM02_GASAC	ENSGACP00000015184	ENSGACP00000006365	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.	Uncharacterized protein.	0.560
G3PC60_GASAC	G3PC41_GASAC	ENSGACP00000015184	ENSGACP00000015165	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.	Protein Z, vitamin K-dependent plasma glycoprotein a; Belongs to the peptidase S1 family.	0.581
G3PC60_GASAC	G3PRG3_GASAC	ENSGACP00000015184	ENSGACP00000020198	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.	Uncharacterized protein.	0.673
G3PC60_GASAC	G3PRZ3_GASAC	ENSGACP00000015184	ENSGACP00000020379	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.705
G3PC60_GASAC	G3PS25_GASAC	ENSGACP00000015184	ENSGACP00000020411	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.	Coagulation factor VII.	0.560
G3PC60_GASAC	G3PS27_GASAC	ENSGACP00000015184	ENSGACP00000020413	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.	Coagulation factor VIIi.	0.560
G3PC60_GASAC	G3PS47_GASAC	ENSGACP00000015184	ENSGACP00000020433	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.	Coagulation factor X.	0.560
G3PC60_GASAC	G3PT67_GASAC	ENSGACP00000015184	ENSGACP00000020803	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.	Uncharacterized protein.	0.697
G3PC60_GASAC	G3PTX5_GASAC	ENSGACP00000015184	ENSGACP00000021062	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.	Gla domain-containing protein.	0.590