82 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EIF2S2	Eukaryotic translation initiation factor 2 subunit beta. (272 aa)
	G3N4S0_GASAC	Uncharacterized protein. (255 aa)
	G3N4Y1_GASAC	Uncharacterized protein. (295 aa)
	G3N5I2_GASAC	Uncharacterized protein. (295 aa)
	G3N5V9_GASAC	Uncharacterized protein. (262 aa)
	G3N5W8_GASAC	Signal sequence receptor, alpha. (295 aa)
	G3N6Q7_GASAC	TatD DNase domain containing 2. (270 aa)
	G3N863_GASAC	Uncharacterized protein. (577 aa)
	G3N8J0_GASAC	Protein disulfide isomerase family A, member 5. (515 aa)
	ENSGACP00000002289	annotation not available (123 aa)
	G3NAE9_GASAC	Uncharacterized protein. (263 aa)
	G3NAF2_GASAC	Uncharacterized protein. (285 aa)
	G3NAG4_GASAC	Uncharacterized protein. (260 aa)
	G3NAP7_GASAC	Uncharacterized protein. (268 aa)
	G3NCD7_GASAC	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1. (269 aa)
	G3NET8_GASAC	Uncharacterized protein. (168 aa)
	G3NEU3_GASAC	Uncharacterized protein. (93 aa)
	G3NFI3_GASAC	Membrane-bound transcription factor peptidase, site 1. (1019 aa)
	G3NFR9_GASAC	Ubiquitin-like domain-containing protein. (382 aa)
	G3NGF7_GASAC	Zinc finger and BTB domain containing 47b. (462 aa)
	G3NGN6_GASAC	Zinc finger and BTB domain containing 10. (550 aa)
	G3NGR8_GASAC	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a. (279 aa)
	G3NJC6_GASAC	DnaJ heat shock protein family (Hsp40) member B9a. (217 aa)
	G3NJD1_GASAC	Kelch domain containing 3. (383 aa)
	HDGF	Heparin binding growth factor. (263 aa)
	G3NKH3_GASAC	Eukaryotic translation initiation factor 2-alpha kinase 3. (994 aa)
	DCSTAMP	Dendrocyte expressed seven transmembrane protein. (470 aa)
	G3NM57_GASAC	Nuclear transcription factor Y, gamma. (355 aa)
	G3NNS7_GASAC	Zinc finger and BTB domain containing 17. (819 aa)
	G3NPH4_GASAC	Membrane-bound transcription factor peptidase, site 2. (446 aa)
	G3NTA0_GASAC	Uncharacterized protein. (279 aa)
	G3NTJ5_GASAC	SRP receptor subunit alpha. (642 aa)
	G3NUL0_GASAC	cAMP responsive element binding protein 3-like 3 like. (311 aa)
	G3NVG3_GASAC	Peptidylprolyl isomerase. (217 aa)
	G3NWV3_GASAC	Uncharacterized protein. (172 aa)
	G3NWV5_GASAC	Uncharacterized protein. (171 aa)
	G3NYM6_GASAC	Nuclear transcription factor Y, alpha, like. (357 aa)
	G3NZJ4_GASAC	Peptidylprolyl isomerase. (211 aa)
	G3NZN8_GASAC	BZIP domain-containing protein. (369 aa)
	G3P054_GASAC	Yip1 interacting factor homolog B (S. cerevisiae). (309 aa)
	G3P0I7_GASAC	Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family. (915 aa)
	G3P134_GASAC	Tripeptidyl peptidase I. (568 aa)
	CRTC1	CREB regulated transcription coactivator 1b. (631 aa)
	G3P1A2_GASAC	Eukaryotic translation initiation factor 2, subunit 1 alpha b. (315 aa)
	G3P2Z2_GASAC	DnaJ heat shock protein family (Hsp40) member B11. (360 aa)
	G3P3B5_GASAC	Zinc finger protein 652. (659 aa)
	G3P4R5_GASAC	TatD DNase domain containing 1. (298 aa)
	G3P5J8_GASAC	BZIP domain-containing protein. (340 aa)
	G3P5K2_GASAC	Uncharacterized protein. (186 aa)
	G3P657_GASAC	SRP receptor subunit beta. (271 aa)
	G3P8F2_GASAC	Si:ch211-153j24.3. (355 aa)
	G3P8V7_GASAC	Myeloid-derived growth factor. (158 aa)
	G3PCY0_GASAC	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2. (262 aa)
	G3PD00_GASAC	Endoplasmic reticulum to nucleus signaling 1. (957 aa)
	G3PD06_GASAC	Activating transcription factor 6. (504 aa)
	TATDN3	TatD DNase domain containing 3. (275 aa)
	G3PE48_GASAC	Activating transcription factor 3. (178 aa)
	G3PEN7_GASAC	CXXC finger protein 1b. (568 aa)
	G3PEZ8_GASAC	Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family. (235 aa)
	G3PF84_GASAC	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (638 aa)
	G3PGL3_GASAC	BTB domain-containing protein. (102 aa)
	G3PGS3_GASAC	Eukaryotic translation initiation factor 2, subunit 3 gamma. (472 aa)
	G3PGS8_GASAC	HERPUD family member 2. (365 aa)
	G3PH20_GASAC	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b. (276 aa)
	G3PHC2_GASAC	cAMP responsive element binding protein 3-like 3a. (428 aa)
	G3PI23_GASAC	DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11. (895 aa)
	G3PL55_GASAC	Exostosin-like glycosyltransferase 2. (355 aa)
	G3PM94_GASAC	Uncharacterized protein. (285 aa)
	G3PML7_GASAC	X-box binding protein 1. (381 aa)
	CTDSP1	CTD small phosphatase 1. (261 aa)
	G3PSA3_GASAC	CREB regulated transcription coactivator 1a. (628 aa)
	G3PWV0_GASAC	Endoplasmic reticulum to nucleus signaling 2. (989 aa)
	G3PY41_GASAC	Yip1 interacting factor homolog A (S. cerevisiae). (336 aa)
	G3PZY5_GASAC	CCAAT enhancer binding protein gamma. (155 aa)
	G3Q4J2_GASAC	Uncharacterized protein. (131 aa)
	G3Q517_GASAC	DnaJ heat shock protein family (Hsp40) member B9b. (224 aa)
	G3Q6Q2_GASAC	Nuclear transcription factor Y, beta a. (204 aa)
	G3Q8K1_GASAC	Activating transcription factor 4a. (392 aa)
	G3Q9H0_GASAC	cAMP responsive element binding protein 3-like 2. (450 aa)
	G3Q9L0_GASAC	Hypoxia up-regulated 1. (998 aa)
	G3Q9L1_GASAC	Uncharacterized protein. (253 aa)
	G3QAZ0_GASAC	Creb3 regulatory factor. (342 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRTC1	DCSTAMP	ENSGACP00000011336	ENSGACP00000006362	CREB regulated transcription coactivator 1b.	Dendrocyte expressed seven transmembrane protein.	0.496
CRTC1	G3NFI3_GASAC	ENSGACP00000011336	ENSGACP00000004085	CREB regulated transcription coactivator 1b.	Membrane-bound transcription factor peptidase, site 1.	0.633
CRTC1	G3NPH4_GASAC	ENSGACP00000011336	ENSGACP00000007238	CREB regulated transcription coactivator 1b.	Membrane-bound transcription factor peptidase, site 2.	0.678
CRTC1	G3NZN8_GASAC	ENSGACP00000011336	ENSGACP00000010811	CREB regulated transcription coactivator 1b.	BZIP domain-containing protein.	0.516
CRTC1	G3P5J8_GASAC	ENSGACP00000011336	ENSGACP00000012871	CREB regulated transcription coactivator 1b.	BZIP domain-containing protein.	0.627
CRTC1	G3P5K2_GASAC	ENSGACP00000011336	ENSGACP00000012875	CREB regulated transcription coactivator 1b.	Uncharacterized protein.	0.627
CRTC1	G3P8F2_GASAC	ENSGACP00000011336	ENSGACP00000013876	CREB regulated transcription coactivator 1b.	Si:ch211-153j24.3.	0.410
CRTC1	G3PD06_GASAC	ENSGACP00000011336	ENSGACP00000015480	CREB regulated transcription coactivator 1b.	Activating transcription factor 6.	0.632
CRTC1	G3PE48_GASAC	ENSGACP00000011336	ENSGACP00000015872	CREB regulated transcription coactivator 1b.	Activating transcription factor 3.	0.410
CRTC1	G3Q8K1_GASAC	ENSGACP00000011336	ENSGACP00000026215	CREB regulated transcription coactivator 1b.	Activating transcription factor 4a.	0.516
DCSTAMP	CRTC1	ENSGACP00000006362	ENSGACP00000011336	Dendrocyte expressed seven transmembrane protein.	CREB regulated transcription coactivator 1b.	0.496
DCSTAMP	G3NET8_GASAC	ENSGACP00000006362	ENSGACP00000003839	Dendrocyte expressed seven transmembrane protein.	Uncharacterized protein.	0.498
DCSTAMP	G3NEU3_GASAC	ENSGACP00000006362	ENSGACP00000003844	Dendrocyte expressed seven transmembrane protein.	Uncharacterized protein.	0.496
DCSTAMP	G3NUL0_GASAC	ENSGACP00000006362	ENSGACP00000009028	Dendrocyte expressed seven transmembrane protein.	cAMP responsive element binding protein 3-like 3 like.	0.767
DCSTAMP	G3PHC2_GASAC	ENSGACP00000006362	ENSGACP00000016997	Dendrocyte expressed seven transmembrane protein.	cAMP responsive element binding protein 3-like 3a.	0.697
DCSTAMP	G3PSA3_GASAC	ENSGACP00000006362	ENSGACP00000020489	Dendrocyte expressed seven transmembrane protein.	CREB regulated transcription coactivator 1a.	0.496
DCSTAMP	G3Q9H0_GASAC	ENSGACP00000006362	ENSGACP00000026535	Dendrocyte expressed seven transmembrane protein.	cAMP responsive element binding protein 3-like 2.	0.496
EIF2S2	G3NKH3_GASAC	ENSGACP00000008099	ENSGACP00000005836	Eukaryotic translation initiation factor 2 subunit beta.	Eukaryotic translation initiation factor 2-alpha kinase 3.	0.754
EIF2S2	G3NZN8_GASAC	ENSGACP00000008099	ENSGACP00000010811	Eukaryotic translation initiation factor 2 subunit beta.	BZIP domain-containing protein.	0.496
EIF2S2	G3P1A2_GASAC	ENSGACP00000008099	ENSGACP00000011375	Eukaryotic translation initiation factor 2 subunit beta.	Eukaryotic translation initiation factor 2, subunit 1 alpha b.	0.999