39 items (Gasterosteus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3N4W1_GASAC	ATP-binding cassette, sub-family D (ALD), member 1. (598 aa)
	G3N6R3_GASAC	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (693 aa)
	DPY19L4	Dpy-19 like 4. (691 aa)
	G3NEC1_GASAC	Carnitine O-acetyltransferase b. (643 aa)
	G3NGD4_GASAC	Podocan. (629 aa)
	G3NN29_GASAC	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters. (484 aa)
	G3NRP6_GASAC	Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. (722 aa)
	G3NSA8_GASAC	AMP-binding domain-containing protein. (620 aa)
	G3NSH6_GASAC	Hydroxysteroid (17-beta) dehydrogenase 4. (739 aa)
	G3NTG7_GASAC	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family. (634 aa)
	G3NYK8_GASAC	Acyl-CoA thioesterase 21. (421 aa)
	G3NZE7_GASAC	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family. (570 aa)
	G3P3Q9_GASAC	Carnitine O-octanoyltransferase. (652 aa)
	G3PFX5_GASAC	Peroxisomal trans-2-enoyl-CoA reductase. (300 aa)
	G3PGR0_GASAC	Dpy-19-like 1, like (H. sapiens). (737 aa)
	G3PJT9_GASAC	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (505 aa)
	G3PKT7_GASAC	Malonyl-CoA decarboxylase. (456 aa)
	G3PMH7_GASAC	Dpy-19 like C-mannosyltransferase 3. (700 aa)
	G3PML2_GASAC	Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family. (313 aa)
	G3PQD2_GASAC	Solute carrier family 27 member 2a. (620 aa)
	G3PQD6_GASAC	AMP-binding domain-containing protein. (621 aa)
	G3PRD8_GASAC	Acyl-CoA binding domain containing 4. (423 aa)
	G3PRY3_GASAC	Hydroxysteroid dehydrogenase like 2. (413 aa)
	G3PU86_GASAC	Phytanoyl-CoA dioxygenase domain containing 1. (290 aa)
	G3PUT5_GASAC	Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family. (539 aa)
	G3PV72_GASAC	Alpha-methylacyl-CoA racemase. (382 aa)
	G3PVB0_GASAC	Nudix (nucleoside diphosphate linked moiety X)-type motif 19. (371 aa)
	G3PVM1_GASAC	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters. (520 aa)
	G3Q1Z7_GASAC	Enoyl-CoA delta isomerase 2. (360 aa)
	G3Q201_GASAC	Succinyl-CoA:glutarate-CoA transferase. (477 aa)
	G3Q3R5_GASAC	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (629 aa)
	G3Q615_GASAC	Phytanoyl-CoA 2-hydroxylase. (334 aa)
	G3Q6G3_GASAC	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (661 aa)
	G3Q823_GASAC	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family. (423 aa)
	G3QB05_GASAC	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (478 aa)
	G3P3S5_GASAC	Carnitine O-octanoyltransferase. (617 aa)
	G3P9M9_GASAC	Acyl-CoA thioesterase 8. (322 aa)
	G3PCH9_GASAC	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (313 aa)
	G3PEP2_GASAC	Zgc:154046; Belongs to the carnitine/choline acetyltransferase family. (628 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N4W1_GASAC	G3NN29_GASAC	ENSGACP00000000331	ENSGACP00000006742	ATP-binding cassette, sub-family D (ALD), member 1.	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.	0.667
G3N4W1_GASAC	G3NSH6_GASAC	ENSGACP00000000331	ENSGACP00000008294	ATP-binding cassette, sub-family D (ALD), member 1.	Hydroxysteroid (17-beta) dehydrogenase 4.	0.528
G3N4W1_GASAC	G3PCH9_GASAC	ENSGACP00000000331	ENSGACP00000015303	ATP-binding cassette, sub-family D (ALD), member 1.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.740
G3N4W1_GASAC	G3PJT9_GASAC	ENSGACP00000000331	ENSGACP00000017869	ATP-binding cassette, sub-family D (ALD), member 1.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.632
G3N4W1_GASAC	G3PML2_GASAC	ENSGACP00000000331	ENSGACP00000018843	ATP-binding cassette, sub-family D (ALD), member 1.	Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.740
G3N4W1_GASAC	G3PRD8_GASAC	ENSGACP00000000331	ENSGACP00000020173	ATP-binding cassette, sub-family D (ALD), member 1.	Acyl-CoA binding domain containing 4.	0.667
G3N4W1_GASAC	G3PRY3_GASAC	ENSGACP00000000331	ENSGACP00000020369	ATP-binding cassette, sub-family D (ALD), member 1.	Hydroxysteroid dehydrogenase like 2.	0.528
G3N4W1_GASAC	G3PUT5_GASAC	ENSGACP00000000331	ENSGACP00000021372	ATP-binding cassette, sub-family D (ALD), member 1.	Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.	0.734
G3N4W1_GASAC	G3PVM1_GASAC	ENSGACP00000000331	ENSGACP00000021660	ATP-binding cassette, sub-family D (ALD), member 1.	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.	0.667
G3N4W1_GASAC	G3Q1Z7_GASAC	ENSGACP00000000331	ENSGACP00000023896	ATP-binding cassette, sub-family D (ALD), member 1.	Enoyl-CoA delta isomerase 2.	0.738
G3N4W1_GASAC	G3Q6G3_GASAC	ENSGACP00000000331	ENSGACP00000025473	ATP-binding cassette, sub-family D (ALD), member 1.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.454
G3N4W1_GASAC	G3Q823_GASAC	ENSGACP00000000331	ENSGACP00000026037	ATP-binding cassette, sub-family D (ALD), member 1.	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	0.453
G3N4W1_GASAC	G3QB05_GASAC	ENSGACP00000000331	ENSGACP00000027071	ATP-binding cassette, sub-family D (ALD), member 1.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.632
G3N6R3_GASAC	G3NEC1_GASAC	ENSGACP00000000988	ENSGACP00000003672	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Carnitine O-acetyltransferase b.	0.604
G3N6R3_GASAC	G3NN29_GASAC	ENSGACP00000000988	ENSGACP00000006742	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.	0.762
G3N6R3_GASAC	G3NRP6_GASAC	ENSGACP00000000988	ENSGACP00000008013	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.964
G3N6R3_GASAC	G3NSA8_GASAC	ENSGACP00000000988	ENSGACP00000008225	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	AMP-binding domain-containing protein.	0.490
G3N6R3_GASAC	G3NSH6_GASAC	ENSGACP00000000988	ENSGACP00000008294	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Hydroxysteroid (17-beta) dehydrogenase 4.	0.945
G3N6R3_GASAC	G3NTG7_GASAC	ENSGACP00000000988	ENSGACP00000008635	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family.	0.614
G3N6R3_GASAC	G3NYK8_GASAC	ENSGACP00000000988	ENSGACP00000010429	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Acyl-CoA thioesterase 21.	0.535