STRINGSTRING
G3P2V6_GASAC G3P2V6_GASAC G3P3D3_GASAC G3P3D3_GASAC G3NU38_GASAC G3NU38_GASAC G3NSE6_GASAC G3NSE6_GASAC G3NLB5_GASAC G3NLB5_GASAC G3NGF8_GASAC G3NGF8_GASAC G3NG72_GASAC G3NG72_GASAC G3NC28_GASAC G3NC28_GASAC PTBP2 PTBP2 G3PAI7_GASAC G3PAI7_GASAC G3P4B9_GASAC G3P4B9_GASAC G3NWJ8_GASAC G3NWJ8_GASAC G3P7K2_GASAC G3P7K2_GASAC G3NUU9_GASAC G3NUU9_GASAC G3Q6T9_GASAC G3Q6T9_GASAC G3Q0L5_GASAC G3Q0L5_GASAC NCBP1 NCBP1 G3PVF9_GASAC G3PVF9_GASAC G3PV24_GASAC G3PV24_GASAC G3PTB1_GASAC G3PTB1_GASAC PTBP3 PTBP3 G3PR20_GASAC G3PR20_GASAC G3PPX5_GASAC G3PPX5_GASAC PTBP1 PTBP1 TIA1 TIA1 POLR2E POLR2E G3PGP0_GASAC G3PGP0_GASAC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
G3P2V6_GASACDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
G3P3D3_GASACEpithelial splicing regulatory protein 1. (709 aa)
G3NU38_GASACDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
G3NSE6_GASACNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (165 aa)
G3NLB5_GASACPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
G3NGF8_GASACTIA1 cytotoxic granule-associated RNA binding protein-like 1. (372 aa)
G3NG72_GASACPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
G3NC28_GASACPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
PTBP2Polypyrimidine tract binding protein 2a. (522 aa)
G3PAI7_GASACPolypyrimidine tract binding protein 1a. (578 aa)
G3P4B9_GASACUncharacterized protein. (388 aa)
G3NWJ8_GASACPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
G3P7K2_GASACHeterogeneous nuclear ribonucleoprotein M. (654 aa)
G3NUU9_GASACGeneral transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (265 aa)
G3Q6T9_GASACDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1653 aa)
G3Q0L5_GASACPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
NCBP1Nuclear cap binding protein subunit 1. (810 aa)
G3PVF9_GASACEpithelial splicing regulatory protein 2. (744 aa)
G3PV24_GASACDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1179 aa)
G3PTB1_GASACCytotoxic granule-associated RNA binding protein 1, like. (389 aa)
PTBP3Polypyrimidine tract binding protein 3. (518 aa)
G3PR20_GASACGeneral transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (276 aa)
G3PPX5_GASACUncharacterized protein. (549 aa)
PTBP1Polypyrimidine tract binding protein 1. (557 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (324 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
G3PGP0_GASACTranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (537 aa)
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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