STRINGSTRING
NCBP1 NCBP1 G3N5S6_GASAC G3N5S6_GASAC G3N755_GASAC G3N755_GASAC G3N9C4_GASAC G3N9C4_GASAC G3NA65_GASAC G3NA65_GASAC G3NBL6_GASAC G3NBL6_GASAC G3NBZ2_GASAC G3NBZ2_GASAC G3NC28_GASAC G3NC28_GASAC G3NE47_GASAC G3NE47_GASAC G3NEU4_GASAC G3NEU4_GASAC G3NG72_GASAC G3NG72_GASAC G3NGL0_GASAC G3NGL0_GASAC G3NHZ7_GASAC G3NHZ7_GASAC G3NKA0_GASAC G3NKA0_GASAC G3NLB5_GASAC G3NLB5_GASAC IWS1 IWS1 G3NMH3_GASAC G3NMH3_GASAC CCNK CCNK G3NQB0_GASAC G3NQB0_GASAC G3NSE6_GASAC G3NSE6_GASAC G3NSU4_GASAC G3NSU4_GASAC G3NU38_GASAC G3NU38_GASAC G3NUU9_GASAC G3NUU9_GASAC ELOB ELOB G3NWE4_GASAC G3NWE4_GASAC G3NWJ8_GASAC G3NWJ8_GASAC G3NWS8_GASAC G3NWS8_GASAC G3NXN8_GASAC G3NXN8_GASAC G3NZD7_GASAC G3NZD7_GASAC G3P0R7_GASAC G3P0R7_GASAC G3P1I5_GASAC G3P1I5_GASAC G3P1V8_GASAC G3P1V8_GASAC G3P1W4_GASAC G3P1W4_GASAC G3P229_GASAC G3P229_GASAC G3P2V6_GASAC G3P2V6_GASAC G3P5Z1_GASAC G3P5Z1_GASAC G3P7H1_GASAC G3P7H1_GASAC G3P8F4_GASAC G3P8F4_GASAC G3P9Q5_GASAC G3P9Q5_GASAC G3PCP7_GASAC G3PCP7_GASAC G3PEW6_GASAC G3PEW6_GASAC G3PFN5_GASAC G3PFN5_GASAC G3PGD4_GASAC G3PGD4_GASAC G3PGP0_GASAC G3PGP0_GASAC G3PID8_GASAC G3PID8_GASAC G3PIF9_GASAC G3PIF9_GASAC POLR2E POLR2E G3PK45_GASAC G3PK45_GASAC G3PMT4_GASAC G3PMT4_GASAC G3PNN5_GASAC G3PNN5_GASAC G3PQ15_GASAC G3PQ15_GASAC G3PQA7_GASAC G3PQA7_GASAC G3PR20_GASAC G3PR20_GASAC G3PR46_GASAC G3PR46_GASAC G3PSA5_GASAC G3PSA5_GASAC G3PSY3_GASAC G3PSY3_GASAC G3PUG5_GASAC G3PUG5_GASAC CDC73 CDC73 G3PV24_GASAC G3PV24_GASAC G3PVC9_GASAC G3PVC9_GASAC G3PX17_GASAC G3PX17_GASAC G3PX63_GASAC G3PX63_GASAC G3PYF9_GASAC G3PYF9_GASAC G3Q0L5_GASAC G3Q0L5_GASAC G3Q0Y4_GASAC G3Q0Y4_GASAC G3Q3M8_GASAC G3Q3M8_GASAC G3Q530_GASAC G3Q530_GASAC G3Q5Y3_GASAC G3Q5Y3_GASAC G3Q6T9_GASAC G3Q6T9_GASAC G3QA22_GASAC G3QA22_GASAC G3QB56_GASAC G3QB56_GASAC G3QBZ7_GASAC G3QBZ7_GASAC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NCBP1Nuclear cap binding protein subunit 1. (810 aa)
G3N5S6_GASACNegative elongation factor complex member C/D. (596 aa)
G3N755_GASACMLLT3 super elongation complex subunit. (523 aa)
G3N9C4_GASACGeneral transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (459 aa)
G3NA65_GASACELL associated factor 1. (249 aa)
G3NBL6_GASACElongin A. (641 aa)
G3NBZ2_GASACCyclin T2; Belongs to the cyclin family. (649 aa)
G3NC28_GASACPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
G3NE47_GASACElongin C paralog a; Belongs to the SKP1 family. (112 aa)
G3NEU4_GASACNegative elongation factor complex member E. (361 aa)
G3NG72_GASACPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
G3NGL0_GASACNegative elongation factor complex member B. (593 aa)
G3NHZ7_GASACGeneral transcription factor IIH subunit. (392 aa)
G3NKA0_GASACCyclin-dependent kinase 2 interacting protein. (210 aa)
G3NLB5_GASACPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
IWS1Interacts with SUPT6H, CTD assembly factor 1. (358 aa)
G3NMH3_GASACTranscription elongation factor SPT5. (1073 aa)
CCNKCyclin K; Belongs to the cyclin family. (416 aa)
G3NQB0_GASACGeneral transcription factor IIH, polypeptide 1. (546 aa)
G3NSE6_GASACNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (165 aa)
G3NSU4_GASACElongin A, like. (597 aa)
G3NU38_GASACDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
G3NUU9_GASACGeneral transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (265 aa)
ELOBElongin B. (119 aa)
G3NWE4_GASACTranscription elongation factor A (SII), 3. (411 aa)
G3NWJ8_GASACPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
G3NWS8_GASACWD repeat domain 61. (305 aa)
G3NXN8_GASACMLLT1 super elongation complex subunit a. (578 aa)
G3NZD7_GASACGeneral transcription factor IIH, polypeptide 3. (300 aa)
G3P0R7_GASACCDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
G3P1I5_GASACRNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (847 aa)
G3P1V8_GASACSi:dkey-12j5.1. (253 aa)
G3P1W4_GASACUncharacterized protein. (156 aa)
G3P229_GASACGeneral transcription factor IIH, polypeptide 5. (71 aa)
G3P2V6_GASACDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
G3P5Z1_GASACCyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (348 aa)
G3P7H1_GASACCyclin H; Belongs to the cyclin family. (324 aa)
G3P8F4_GASACTranscription elongation factor A (SII), 2. (302 aa)
G3P9Q5_GASACPAF1 homolog, Paf1/RNA polymerase II complex component. (527 aa)
G3PCP7_GASACCyclin T1; Belongs to the cyclin family. (681 aa)
G3PEW6_GASACRTF1 homolog, Paf1/RNA polymerase II complex component. (677 aa)
G3PFN5_GASACExcision repair cross-complementation group 2. (815 aa)
G3PGD4_GASACElongation factor RNA polymerase II. (681 aa)
G3PGP0_GASACTranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (537 aa)
G3PID8_GASACCyclin K. (349 aa)
G3PIF9_GASACCyclin Q; Belongs to the cyclin family. (245 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
G3PK45_GASACElongin B. (119 aa)
G3PMT4_GASACUncharacterized protein. (212 aa)
G3PNN5_GASACELL associated factor 2. (271 aa)
G3PQ15_GASACCyclin T2b; Belongs to the cyclin family. (532 aa)
G3PQA7_GASACLEO1 homolog, Paf1/RNA polymerase II complex component. (664 aa)
G3PR20_GASACGeneral transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (276 aa)
G3PR46_GASACExcision repair cross-complementation group 3. (787 aa)
G3PSA5_GASACSolute carrier family 39 member 13. (335 aa)
G3PSY3_GASACCTR9 homolog, Paf1/RNA polymerase II complex component. (1160 aa)
G3PUG5_GASACCell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (530 aa)
CDC73CDC73_N domain-containing protein. (277 aa)
G3PV24_GASACDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1179 aa)
G3PVC9_GASACUncharacterized protein. (1177 aa)
G3PX17_GASACUncharacterized protein. (187 aa)
G3PX63_GASACUncharacterized protein. (243 aa)
G3PYF9_GASACTranscription elongation factor A (SII), 1. (311 aa)
G3Q0L5_GASACPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
G3Q0Y4_GASACFACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (709 aa)
G3Q3M8_GASACCyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (372 aa)
G3Q530_GASACSPT16 homolog, facilitates chromatin remodeling subunit. (1040 aa)
G3Q5Y3_GASACNegative elongation factor complex member A. (531 aa)
G3Q6T9_GASACDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1653 aa)
G3QA22_GASACTranscription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
G3QB56_GASACTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1720 aa)
G3QBZ7_GASACAF4/FMR2 family, member 4. (1145 aa)
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.