(15 nodes) (2016) Natural variation in brain gene expression profiles of aggressive and nonaggressive individual sticklebacks. network (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3Q3I0_GASAC	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (412 aa)
	G3N8Q1_GASAC	Vasoactive intestinal peptide. (78 aa)
	G3N9B5_GASAC	Peptidylprolyl isomerase. (458 aa)
	G3NB07_GASAC	Drebrin-like a. (420 aa)
	G3NGC7_GASAC	Vasoactive intestinal peptide receptor 1b; Belongs to the G-protein coupled receptor 2 family. (433 aa)
	G3NHU7_GASAC	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (420 aa)
	G3P0H5_GASAC	Synaptotagmin XIVb. (551 aa)
	AVPR2a	Arginine vasopressin receptor 2a, duplicate a. (341 aa)
	G3P480_GASAC	CCR4-NOT transcription complex, subunit 3b. (788 aa)
	G3PI64_GASAC	Chromogranin A. (368 aa)
	GRIK3	Glutamate ionotropic receptor kainate type subunit 3. (880 aa)
	G3PNF9_GASAC	Doublesex and mab-3 related transcription factor 3a. (467 aa)
	G3PS66_GASAC	Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (269 aa)
	G3Q3H4_GASAC	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (349 aa)
	G3Q3I3_GASAC	Glutamate receptor, ionotropic, AMPA 1a. (963 aa)

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N8Q1_GASAC	G3NGC7_GASAC	ENSGACP00000001687	ENSGACP00000004382	Vasoactive intestinal peptide.	Vasoactive intestinal peptide receptor 1b; Belongs to the G-protein coupled receptor 2 family.	0.957
G3NB07_GASAC	G3NHU7_GASAC	ENSGACP00000002503	ENSGACP00000004907	Drebrin-like a.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.510
G3NGC7_GASAC	G3N8Q1_GASAC	ENSGACP00000004382	ENSGACP00000001687	Vasoactive intestinal peptide receptor 1b; Belongs to the G-protein coupled receptor 2 family.	Vasoactive intestinal peptide.	0.957
G3NHU7_GASAC	G3NB07_GASAC	ENSGACP00000004907	ENSGACP00000002503	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Drebrin-like a.	0.510
G3Q3I3_GASAC	GRIK3	ENSGACP00000024435	ENSGACP00000018295	Glutamate receptor, ionotropic, AMPA 1a.	Glutamate ionotropic receptor kainate type subunit 3.	0.604
GRIK3	G3Q3I3_GASAC	ENSGACP00000018295	ENSGACP00000024435	Glutamate ionotropic receptor kainate type subunit 3.	Glutamate receptor, ionotropic, AMPA 1a.	0.604