Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KJL42541.1 | deaD_1 | RS82_02098 | RS82_01022 | Hypothetical protein. | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.765 |
| KJL42541.1 | pnp | RS82_02098 | RS82_00959 | Hypothetical protein. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.683 |
| KJL42541.1 | rapA_2 | RS82_02098 | RS82_03885 | Hypothetical protein. | RNA polymerase-associated protein RapA. | 0.681 |
| KJL42541.1 | rhlE_2 | RS82_02098 | RS82_01212 | Hypothetical protein. | ATP-dependent RNA helicase RhlE. | 0.765 |
| KJL42541.1 | rnd | RS82_02098 | RS82_03937 | Hypothetical protein. | Ribonuclease D. | 0.632 |
| KJL42541.1 | rnr | RS82_02098 | RS82_00254 | Hypothetical protein. | Ribonuclease R. | 0.785 |
| KJL42541.1 | rph | RS82_02098 | RS82_00659 | Hypothetical protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.644 |
| cspA_1 | deaD_1 | RS82_00439 | RS82_01022 | Putative cold shock protein A. | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.743 |
| cspA_1 | pnp | RS82_00439 | RS82_00959 | Putative cold shock protein A. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.703 |
| cspA_1 | rapA_2 | RS82_00439 | RS82_03885 | Putative cold shock protein A. | RNA polymerase-associated protein RapA. | 0.681 |
| cspA_1 | rhlE_2 | RS82_00439 | RS82_01212 | Putative cold shock protein A. | ATP-dependent RNA helicase RhlE. | 0.743 |
| cspA_1 | rnr | RS82_00439 | RS82_00254 | Putative cold shock protein A. | Ribonuclease R. | 0.757 |
| cspA_1 | rph | RS82_00439 | RS82_00659 | Putative cold shock protein A. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.644 |
| cspA_3 | deaD_1 | RS82_03659 | RS82_01022 | Putative cold shock protein A. | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.743 |
| cspA_3 | pnp | RS82_03659 | RS82_00959 | Putative cold shock protein A. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.703 |
| cspA_3 | rapA_2 | RS82_03659 | RS82_03885 | Putative cold shock protein A. | RNA polymerase-associated protein RapA. | 0.681 |
| cspA_3 | rhlE_2 | RS82_03659 | RS82_01212 | Putative cold shock protein A. | ATP-dependent RNA helicase RhlE. | 0.743 |
| cspA_3 | rnr | RS82_03659 | RS82_00254 | Putative cold shock protein A. | Ribonuclease R. | 0.757 |
| cspA_3 | rph | RS82_03659 | RS82_00659 | Putative cold shock protein A. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.644 |
| deaD_1 | KJL42541.1 | RS82_01022 | RS82_02098 | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | Hypothetical protein. | 0.765 |
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