Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KJL40297.1 | rho | RS82_03623 | RS82_01128 | R3H domain protein. | Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.702 |
| KJL40297.1 | rng | RS82_03623 | RS82_04051 | R3H domain protein. | Ribonuclease G. | 0.789 |
| KJL40297.1 | rnj | RS82_03623 | RS82_00944 | R3H domain protein. | Putative ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.418 |
| KJL41021.1 | cshA | RS82_02936 | RS82_00620 | PspC domain protein. | DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family. | 0.411 |
| KJL41021.1 | deaD_1 | RS82_02936 | RS82_01022 | PspC domain protein. | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.411 |
| KJL41021.1 | eno | RS82_02936 | RS82_00537 | PspC domain protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.743 |
| KJL41021.1 | groL1 | RS82_02936 | RS82_01655 | PspC domain protein. | 60 kDa chaperonin 1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.980 |
| KJL41021.1 | pnp | RS82_02936 | RS82_00959 | PspC domain protein. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.456 |
| KJL41021.1 | rhlE_1 | RS82_02936 | RS82_00449 | PspC domain protein. | ATP-dependent RNA helicase RhlE. | 0.411 |
| KJL41021.1 | rhlE_2 | RS82_02936 | RS82_01212 | PspC domain protein. | ATP-dependent RNA helicase RhlE. | 0.411 |
| KJL41021.1 | rng | RS82_02936 | RS82_04051 | PspC domain protein. | Ribonuclease G. | 0.663 |
| KJL41021.1 | rnr | RS82_02936 | RS82_00254 | PspC domain protein. | Ribonuclease R. | 0.484 |
| KJL41623.1 | ppk | RS82_02853 | RS82_01615 | Polyphosphate kinase 2 (PPK2). | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.819 |
| KJL43873.1 | rnd | RS82_01249 | RS82_03937 | Ski2-like helicase. | Ribonuclease D. | 0.498 |
| KJL44446.1 | ppk | RS82_00840 | RS82_01615 | Polyphosphate kinase 2 (PPK2). | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.815 |
| KJL44963.1 | ppk | RS82_00470 | RS82_01615 | Polyphosphate kinase 2 (PPK2). | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.736 |
| KJL45086.1 | ppk | RS82_00435 | RS82_01615 | Polyphosphate kinase 2 (PPK2). | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.809 |
| cca | cshA | RS82_03610 | RS82_00620 | CCA-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family. | 0.463 |
| cca | eno | RS82_03610 | RS82_00537 | CCA-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.655 |
| cca | groL1 | RS82_03610 | RS82_01655 | CCA-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 60 kDa chaperonin 1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.444 |
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