(5 nodes) Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity network (Methylobacterium oryzae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	MOC_0008	Extracellular solute-binding protein. (294 aa)
	MOC_2673	Putative extracellular solute-binding protein. (307 aa)
	MOC_2674	Polar amino acid ABC transporter, inner membrane subunit. (240 aa)
	MOC_2675	Polar amino acid ABC transporter, inner membrane subunit. (230 aa)
	gltL	Glutamate Aspartate transport ATP-binding protein GltL. (286 aa)

Your Current Organism:

Methylobacterium oryzae

NCBI taxonomy Id: 693986
Other names: M. oryzae CBMB20, Methylobacterium oryzae CBMB20, Methylobacterium oryzae str. CBMB20, Methylobacterium oryzae strain CBMB20

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MOC_0008	MOC_2673	MOC_0008	MOC_2673	Extracellular solute-binding protein.	Putative extracellular solute-binding protein.	0.909
MOC_0008	MOC_2674	MOC_0008	MOC_2674	Extracellular solute-binding protein.	Polar amino acid ABC transporter, inner membrane subunit.	0.966
MOC_0008	MOC_2675	MOC_0008	MOC_2675	Extracellular solute-binding protein.	Polar amino acid ABC transporter, inner membrane subunit.	0.965
MOC_0008	gltL	MOC_0008	MOC_2676	Extracellular solute-binding protein.	Glutamate Aspartate transport ATP-binding protein GltL.	0.960
MOC_2673	MOC_0008	MOC_2673	MOC_0008	Putative extracellular solute-binding protein.	Extracellular solute-binding protein.	0.909
MOC_2673	MOC_2674	MOC_2673	MOC_2674	Putative extracellular solute-binding protein.	Polar amino acid ABC transporter, inner membrane subunit.	0.992
MOC_2673	MOC_2675	MOC_2673	MOC_2675	Putative extracellular solute-binding protein.	Polar amino acid ABC transporter, inner membrane subunit.	0.981
MOC_2673	gltL	MOC_2673	MOC_2676	Putative extracellular solute-binding protein.	Glutamate Aspartate transport ATP-binding protein GltL.	0.989
MOC_2674	MOC_0008	MOC_2674	MOC_0008	Polar amino acid ABC transporter, inner membrane subunit.	Extracellular solute-binding protein.	0.966
MOC_2674	MOC_2673	MOC_2674	MOC_2673	Polar amino acid ABC transporter, inner membrane subunit.	Putative extracellular solute-binding protein.	0.992
MOC_2674	MOC_2675	MOC_2674	MOC_2675	Polar amino acid ABC transporter, inner membrane subunit.	Polar amino acid ABC transporter, inner membrane subunit.	0.959
MOC_2674	gltL	MOC_2674	MOC_2676	Polar amino acid ABC transporter, inner membrane subunit.	Glutamate Aspartate transport ATP-binding protein GltL.	0.996
MOC_2675	MOC_0008	MOC_2675	MOC_0008	Polar amino acid ABC transporter, inner membrane subunit.	Extracellular solute-binding protein.	0.965
MOC_2675	MOC_2673	MOC_2675	MOC_2673	Polar amino acid ABC transporter, inner membrane subunit.	Putative extracellular solute-binding protein.	0.981
MOC_2675	MOC_2674	MOC_2675	MOC_2674	Polar amino acid ABC transporter, inner membrane subunit.	Polar amino acid ABC transporter, inner membrane subunit.	0.959
MOC_2675	gltL	MOC_2675	MOC_2676	Polar amino acid ABC transporter, inner membrane subunit.	Glutamate Aspartate transport ATP-binding protein GltL.	0.995
gltL	MOC_0008	MOC_2676	MOC_0008	Glutamate Aspartate transport ATP-binding protein GltL.	Extracellular solute-binding protein.	0.960
gltL	MOC_2673	MOC_2676	MOC_2673	Glutamate Aspartate transport ATP-binding protein GltL.	Putative extracellular solute-binding protein.	0.989
gltL	MOC_2674	MOC_2676	MOC_2674	Glutamate Aspartate transport ATP-binding protein GltL.	Polar amino acid ABC transporter, inner membrane subunit.	0.996
gltL	MOC_2675	MOC_2676	MOC_2675	Glutamate Aspartate transport ATP-binding protein GltL.	Polar amino acid ABC transporter, inner membrane subunit.	0.995

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