(29 nodes) Fatty acid degradation network (Methylobacterium oryzae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	MOC_0002	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
	MOC_0005	3-hydroxyacyl-CoA dehydrogenase NAD-binding protein. (733 aa)
	MOC_0193	Acyl-CoA dehydrogenase. (387 aa)
	MOC_0264	AMP-dependent synthetase. (614 aa)
	MOC_0294	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (378 aa)
	MOC_0593	Iron-containing alcohol dehydrogenase. (397 aa)
	MOC_0716	AMP-dependent synthetase. (584 aa)
	MOC_0868	acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (389 aa)
	MOC_1124	AMP-dependent synthetase. (1137 aa)
	MOC_1277	3-hydroxyacyl-CoA dehydrogenase NAD-binding/Enoyl-CoA hydratase. (690 aa)
	MOC_1279	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
	MOC_1611	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
	MOC_2223	Acyl-CoA dehydrogenase. (411 aa)
	MOC_2227	AMP-dependent synthetase. (590 aa)
	MOC_2232	FAD-dependent pyridine nucleotide-disulfide oxidoreductase. (423 aa)
	MOC_3217	Acyl-CoA dehydrogenase. (382 aa)
	MOC_3766	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (378 aa)
	MOC_3767	3-hydroxyacyl-CoA dehydrogenase NAD-binding/Enoyl-CoA hydratase. (773 aa)
	MOC_4083	FAD-dependent pyridine nucleotide-disulfide oxidoreductase. (413 aa)
	MOC_4329	Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
	MOC_4331	Enoyl-CoA hydratase/isomerase. (353 aa)
	MOC_4374	Acyl-CoA dehydrogenase domain-containing protein. (579 aa)
	MOC_4605	Zn-containing alcohol dehydrogenase. (327 aa)
	MOC_5111	Acyl-CoA dehydrogenase. (401 aa)
	MOC_5112	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
	MOC_5231	FAD-dependent pyridine nucleotide-disulfide oxidoreductase:Rubredoxin-type Fe(Cys)4 protein. (444 aa)
	MOC_5534	Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family. (512 aa)
	MOC_5802	Glutaryl-CoA dehydrogenase. (409 aa)
	MOC_5827	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)

Your Current Organism:

Methylobacterium oryzae

NCBI taxonomy Id: 693986
Other names: M. oryzae CBMB20, Methylobacterium oryzae CBMB20, Methylobacterium oryzae str. CBMB20, Methylobacterium oryzae strain CBMB20

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
MOC_0002	MOC_0005	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.	0.999
MOC_0002	MOC_0193	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA dehydrogenase.	0.806
MOC_0002	MOC_0868	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.600
MOC_0002	MOC_1277	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxyacyl-CoA dehydrogenase NAD-binding/Enoyl-CoA hydratase.	0.997
MOC_0002	MOC_1279	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.661
MOC_0002	MOC_1611	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.675
MOC_0002	MOC_2223	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA dehydrogenase.	0.837
MOC_0002	MOC_3217	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA dehydrogenase.	0.806
MOC_0002	MOC_3766	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.913
MOC_0002	MOC_3767	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxyacyl-CoA dehydrogenase NAD-binding/Enoyl-CoA hydratase.	0.997
MOC_0002	MOC_4329	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.721
MOC_0002	MOC_4331	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Enoyl-CoA hydratase/isomerase.	0.721
MOC_0002	MOC_4374	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA dehydrogenase domain-containing protein.	0.835
MOC_0002	MOC_5111	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA dehydrogenase.	0.806
MOC_0002	MOC_5112	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.660
MOC_0002	MOC_5802	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Glutaryl-CoA dehydrogenase.	0.469
MOC_0002	MOC_5827	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.669
MOC_0005	MOC_0002	3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.999
MOC_0005	MOC_0193	3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.	Acyl-CoA dehydrogenase.	0.988
MOC_0005	MOC_0264	3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.	AMP-dependent synthetase.	0.534

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