(12 nodes) Mixed, incl. Spatacsin, and AP-type membrane coat adaptor complex network (Ixodes scapularis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B7P138_IXOSC	Uncharacterized protein. (270 aa)
	B7PRH1_IXOSC	Clathrin_bdg domain-containing protein. (204 aa)
	B7PYX7_IXOSC	Uncharacterized protein. (332 aa)
	B7Q4G8_IXOSC	Transferrin, putative (Fragment). (586 aa)
	B7Q8P4_IXOSC	Uncharacterized protein. (562 aa)
	B7Q8P5_IXOSC	Uncharacterized protein. (741 aa)
	B7Q8P6_IXOSC	Spatacsin_C domain-containing protein. (509 aa)
	B7Q9W4_IXOSC	Uncharacterized protein. (189 aa)
	B7QK42_IXOSC	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (460 aa)
	B7QL72_IXOSC	Zinc finger protein, putative. (2312 aa)
	B7QLF5_IXOSC	Uncharacterized protein. (202 aa)
	B7QMV0_IXOSC	Acid cluster protein 33 family protein. (115 aa)

Your Current Organism:

Ixodes scapularis

NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B7P138_IXOSC	B7PRH1_IXOSC	B7P138	B7PRH1	Uncharacterized protein.	Clathrin_bdg domain-containing protein.	0.540
B7P138_IXOSC	B7PYX7_IXOSC	B7P138	B7PYX7	Uncharacterized protein.	Uncharacterized protein.	0.795
B7P138_IXOSC	B7Q8P5_IXOSC	B7P138	B7Q8P5	Uncharacterized protein.	Uncharacterized protein.	0.526
B7P138_IXOSC	B7Q8P6_IXOSC	B7P138	B7Q8P6	Uncharacterized protein.	Spatacsin_C domain-containing protein.	0.526
B7P138_IXOSC	B7Q9W4_IXOSC	B7P138	B7Q9W4	Uncharacterized protein.	Uncharacterized protein.	0.540
B7P138_IXOSC	B7QK42_IXOSC	B7P138	B7QK42	Uncharacterized protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.859
B7P138_IXOSC	B7QL72_IXOSC	B7P138	B7QL72	Uncharacterized protein.	Zinc finger protein, putative.	0.569
B7P138_IXOSC	B7QLF5_IXOSC	B7P138	B7QLF5	Uncharacterized protein.	Uncharacterized protein.	0.878
B7PRH1_IXOSC	B7P138_IXOSC	B7PRH1	B7P138	Clathrin_bdg domain-containing protein.	Uncharacterized protein.	0.540
B7PRH1_IXOSC	B7Q9W4_IXOSC	B7PRH1	B7Q9W4	Clathrin_bdg domain-containing protein.	Uncharacterized protein.	0.540
B7PRH1_IXOSC	B7QK42_IXOSC	B7PRH1	B7QK42	Clathrin_bdg domain-containing protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.540
B7PRH1_IXOSC	B7QLF5_IXOSC	B7PRH1	B7QLF5	Clathrin_bdg domain-containing protein.	Uncharacterized protein.	0.540
B7PYX7_IXOSC	B7P138_IXOSC	B7PYX7	B7P138	Uncharacterized protein.	Uncharacterized protein.	0.795
B7PYX7_IXOSC	B7Q8P5_IXOSC	B7PYX7	B7Q8P5	Uncharacterized protein.	Uncharacterized protein.	0.565
B7PYX7_IXOSC	B7Q8P6_IXOSC	B7PYX7	B7Q8P6	Uncharacterized protein.	Spatacsin_C domain-containing protein.	0.565
B7PYX7_IXOSC	B7QK42_IXOSC	B7PYX7	B7QK42	Uncharacterized protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.649
B7PYX7_IXOSC	B7QL72_IXOSC	B7PYX7	B7QL72	Uncharacterized protein.	Zinc finger protein, putative.	0.695
B7PYX7_IXOSC	B7QLF5_IXOSC	B7PYX7	B7QLF5	Uncharacterized protein.	Uncharacterized protein.	0.762
B7PYX7_IXOSC	B7QMV0_IXOSC	B7PYX7	B7QMV0	Uncharacterized protein.	Acid cluster protein 33 family protein.	0.539
B7Q4G8_IXOSC	B7QMV0_IXOSC	B7Q4G8	B7QMV0	Transferrin, putative (Fragment).	Acid cluster protein 33 family protein.	0.568