(11 nodes) Autolysosome network (Ixodes scapularis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B7PRM4_IXOSC	VAMP-7, putative; Belongs to the synaptobrevin family. (218 aa)
	B7PYM6_IXOSC	Tumor suppressor candidate, putative (Fragment). (292 aa)
	B7Q468_IXOSC	WD-repeat containing protein; Belongs to the WD repeat SEC13 family. (370 aa)
	B7Q4D2_IXOSC	RAS-related protein, putative (Fragment). (149 aa)
	B7Q4D3_IXOSC	Rab39 family protein. (78 aa)
	B7Q8K7_IXOSC	Uncharacterized protein. (719 aa)
	B7QH67_IXOSC	Uncharacterized protein. (475 aa)
	B7QL02_IXOSC	Peptidylprolyl isomerase. (134 aa)
	B7P1R1_IXOSC	Rab3 GTPaseactivating protein, non-catalytic subunit family protein. (971 aa)
	B7P6C7_IXOSC	RAB-18, putative. (201 aa)
	B7PK64_IXOSC	Synaptojanin, putative. (921 aa)

Your Current Organism:

Ixodes scapularis

NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B7P1R1_IXOSC	B7P6C7_IXOSC	B7P1R1	B7P6C7	Rab3 GTPaseactivating protein, non-catalytic subunit family protein.	RAB-18, putative.	0.850
B7P6C7_IXOSC	B7P1R1_IXOSC	B7P6C7	B7P1R1	RAB-18, putative.	Rab3 GTPaseactivating protein, non-catalytic subunit family protein.	0.850
B7PRM4_IXOSC	B7Q8K7_IXOSC	B7PRM4	B7Q8K7	VAMP-7, putative; Belongs to the synaptobrevin family.	Uncharacterized protein.	0.414
B7PYM6_IXOSC	B7Q468_IXOSC	B7PYM6	B7Q468	Tumor suppressor candidate, putative (Fragment).	WD-repeat containing protein; Belongs to the WD repeat SEC13 family.	0.998
B7PYM6_IXOSC	B7QH67_IXOSC	B7PYM6	B7QH67	Tumor suppressor candidate, putative (Fragment).	Uncharacterized protein.	0.998
B7Q468_IXOSC	B7PYM6_IXOSC	B7Q468	B7PYM6	WD-repeat containing protein; Belongs to the WD repeat SEC13 family.	Tumor suppressor candidate, putative (Fragment).	0.998
B7Q468_IXOSC	B7QH67_IXOSC	B7Q468	B7QH67	WD-repeat containing protein; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.996
B7Q8K7_IXOSC	B7PRM4_IXOSC	B7Q8K7	B7PRM4	Uncharacterized protein.	VAMP-7, putative; Belongs to the synaptobrevin family.	0.414
B7QH67_IXOSC	B7PYM6_IXOSC	B7QH67	B7PYM6	Uncharacterized protein.	Tumor suppressor candidate, putative (Fragment).	0.998
B7QH67_IXOSC	B7Q468_IXOSC	B7QH67	B7Q468	Uncharacterized protein.	WD-repeat containing protein; Belongs to the WD repeat SEC13 family.	0.996