(4 nodes) Gemini of coiled bodies network (Ixodes scapularis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B7PUC2_IXOSC	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (242 aa)
	B7PUT5_IXOSC	Survival motor neuron protein, putative (Fragment). (164 aa)
	B7QLM0_IXOSC	Uncharacterized protein. (55 aa)
	B7PET2_IXOSC	Survival motor neuron protein, putative (Fragment). (181 aa)

Your Current Organism:

Ixodes scapularis

NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B7PET2_IXOSC	B7PUC2_IXOSC	B7PET2	B7PUC2	Survival motor neuron protein, putative (Fragment).	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.953
B7PET2_IXOSC	B7PUT5_IXOSC	B7PET2	B7PUT5	Survival motor neuron protein, putative (Fragment).	Survival motor neuron protein, putative (Fragment).	0.904
B7PET2_IXOSC	B7QLM0_IXOSC	B7PET2	B7QLM0	Survival motor neuron protein, putative (Fragment).	Uncharacterized protein.	0.902
B7PUC2_IXOSC	B7PET2_IXOSC	B7PUC2	B7PET2	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Survival motor neuron protein, putative (Fragment).	0.953
B7PUC2_IXOSC	B7PUT5_IXOSC	B7PUC2	B7PUT5	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Survival motor neuron protein, putative (Fragment).	0.953
B7PUC2_IXOSC	B7QLM0_IXOSC	B7PUC2	B7QLM0	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Uncharacterized protein.	0.968
B7PUT5_IXOSC	B7PET2_IXOSC	B7PUT5	B7PET2	Survival motor neuron protein, putative (Fragment).	Survival motor neuron protein, putative (Fragment).	0.904
B7PUT5_IXOSC	B7PUC2_IXOSC	B7PUT5	B7PUC2	Survival motor neuron protein, putative (Fragment).	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.953
B7PUT5_IXOSC	B7QLM0_IXOSC	B7PUT5	B7QLM0	Survival motor neuron protein, putative (Fragment).	Uncharacterized protein.	0.902
B7QLM0_IXOSC	B7PET2_IXOSC	B7QLM0	B7PET2	Uncharacterized protein.	Survival motor neuron protein, putative (Fragment).	0.902
B7QLM0_IXOSC	B7PUC2_IXOSC	B7QLM0	B7PUC2	Uncharacterized protein.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.968
B7QLM0_IXOSC	B7PUT5_IXOSC	B7QLM0	B7PUT5	Uncharacterized protein.	Survival motor neuron protein, putative (Fragment).	0.902