(16 nodes) Neuron projection cytoplasm network (Ixodes scapularis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B7P9A9_IXOSC	HyFMR1 protein, putative (Fragment). (506 aa)
	B7PFD0_IXOSC	Staufen, putative (Fragment). (651 aa)
	B7PFP0_IXOSC	Nanos-type domain-containing protein; Belongs to the nanos family. (127 aa)
	B7PGW3_IXOSC	Uncharacterized protein. (147 aa)
	B7PM92_IXOSC	PIN domain-containing RNA-binding protein, putative. (315 aa)
	LIS1_IXOSC	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. (411 aa)
	B7PTZ6_IXOSC	Pacman protein, putative. (1112 aa)
	B7PXU6_IXOSC	Uncharacterized protein. (819 aa)
	B7PZ74_IXOSC	Nonsense-mediated mRNA decay protein, putative. (1122 aa)
	B7Q1T8_IXOSC	Cold shock domain protein A, putative. (152 aa)
	B7Q2L2_IXOSC	Btz domain-containing protein. (438 aa)
	B7Q3Z0_IXOSC	Y box binding protein, putative. (131 aa)
	B7Q4G3_IXOSC	5' nucleotidase, putative; Belongs to the nanos family. (138 aa)
	B7Q4N6_IXOSC	Uncharacterized protein. (222 aa)
	B7Q609_IXOSC	Cytoplasmic dynein heavy chain, putative (Fragment). (2827 aa)
	B7QF29_IXOSC	Ribosomal DEAD box protein, putative (Fragment); Belongs to the DEAD box helicase family. (321 aa)

Your Current Organism:

Ixodes scapularis

NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B7P9A9_IXOSC	B7PFD0_IXOSC	B7P9A9	B7PFD0	HyFMR1 protein, putative (Fragment).	Staufen, putative (Fragment).	0.474
B7P9A9_IXOSC	B7Q4N6_IXOSC	B7P9A9	B7Q4N6	HyFMR1 protein, putative (Fragment).	Uncharacterized protein.	0.419
B7P9A9_IXOSC	B7QF29_IXOSC	B7P9A9	B7QF29	HyFMR1 protein, putative (Fragment).	Ribosomal DEAD box protein, putative (Fragment); Belongs to the DEAD box helicase family.	0.588
B7PFD0_IXOSC	B7P9A9_IXOSC	B7PFD0	B7P9A9	Staufen, putative (Fragment).	HyFMR1 protein, putative (Fragment).	0.474
B7PFD0_IXOSC	B7PZ74_IXOSC	B7PFD0	B7PZ74	Staufen, putative (Fragment).	Nonsense-mediated mRNA decay protein, putative.	0.718
B7PM92_IXOSC	B7Q4N6_IXOSC	B7PM92	B7Q4N6	PIN domain-containing RNA-binding protein, putative.	Uncharacterized protein.	0.455
B7PM92_IXOSC	B7QF29_IXOSC	B7PM92	B7QF29	PIN domain-containing RNA-binding protein, putative.	Ribosomal DEAD box protein, putative (Fragment); Belongs to the DEAD box helicase family.	0.592
B7PTZ6_IXOSC	B7PZ74_IXOSC	B7PTZ6	B7PZ74	Pacman protein, putative.	Nonsense-mediated mRNA decay protein, putative.	0.841
B7PTZ6_IXOSC	B7Q4N6_IXOSC	B7PTZ6	B7Q4N6	Pacman protein, putative.	Uncharacterized protein.	0.720
B7PTZ6_IXOSC	B7QF29_IXOSC	B7PTZ6	B7QF29	Pacman protein, putative.	Ribosomal DEAD box protein, putative (Fragment); Belongs to the DEAD box helicase family.	0.741
B7PXU6_IXOSC	B7Q4N6_IXOSC	B7PXU6	B7Q4N6	Uncharacterized protein.	Uncharacterized protein.	0.940
B7PXU6_IXOSC	B7QF29_IXOSC	B7PXU6	B7QF29	Uncharacterized protein.	Ribosomal DEAD box protein, putative (Fragment); Belongs to the DEAD box helicase family.	0.968
B7PZ74_IXOSC	B7PFD0_IXOSC	B7PZ74	B7PFD0	Nonsense-mediated mRNA decay protein, putative.	Staufen, putative (Fragment).	0.718
B7PZ74_IXOSC	B7PTZ6_IXOSC	B7PZ74	B7PTZ6	Nonsense-mediated mRNA decay protein, putative.	Pacman protein, putative.	0.841
B7PZ74_IXOSC	B7Q2L2_IXOSC	B7PZ74	B7Q2L2	Nonsense-mediated mRNA decay protein, putative.	Btz domain-containing protein.	0.972
B7PZ74_IXOSC	B7Q4N6_IXOSC	B7PZ74	B7Q4N6	Nonsense-mediated mRNA decay protein, putative.	Uncharacterized protein.	0.522
B7PZ74_IXOSC	B7QF29_IXOSC	B7PZ74	B7QF29	Nonsense-mediated mRNA decay protein, putative.	Ribosomal DEAD box protein, putative (Fragment); Belongs to the DEAD box helicase family.	0.733
B7Q1T8_IXOSC	B7Q3Z0_IXOSC	B7Q1T8	B7Q3Z0	Cold shock domain protein A, putative.	Y box binding protein, putative.	0.433
B7Q1T8_IXOSC	B7Q4N6_IXOSC	B7Q1T8	B7Q4N6	Cold shock domain protein A, putative.	Uncharacterized protein.	0.455
B7Q1T8_IXOSC	B7QF29_IXOSC	B7Q1T8	B7QF29	Cold shock domain protein A, putative.	Ribosomal DEAD box protein, putative (Fragment); Belongs to the DEAD box helicase family.	0.592