(20 nodes) K Homology domain, type 1 superfamily network (Ixodes scapularis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B7P9A9_IXOSC	HyFMR1 protein, putative (Fragment). (506 aa)
	B7P8C3_IXOSC	Polyribonucleotide nucleotidyltransferase, putative (Fragment). (670 aa)
	B7P7L2_IXOSC	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (352 aa)
	B7P4K4_IXOSC	Poly(Rc) binding protein, putative. (398 aa)
	B7P3N6_IXOSC	Transformation upregulated nuclear protein, putative. (316 aa)
	B7PGT3_IXOSC	Activating signal cointegrator 1 complex subunit, putative. (381 aa)
	B7PN34_IXOSC	KH domain RNA binding protein, putative (Fragment). (609 aa)
	B7PQM3_IXOSC	RNA-binding protein Nova-1, putative (Fragment). (474 aa)
	B7PTM3_IXOSC	Zinc finger protein, putative (Fragment). (135 aa)
	B7PX06_IXOSC	A kinase anchor protein, putative. (311 aa)
	B7PY39_IXOSC	Rrp4, putative. (132 aa)
	B7PYP4_IXOSC	Polyribonucleotide nucleotidyltransferase, putative (Fragment). (723 aa)
	B7Q010_IXOSC	KH domain-containing protein. (152 aa)
	B7Q368_IXOSC	High-density lipoprotein-binding protein, putative. (1283 aa)
	B7Q3C5_IXOSC	Heterogeneous nuclear ribonucleoprotein k, putative. (132 aa)
	B7Q3I5_IXOSC	Uncharacterized protein. (610 aa)
	B7Q5M2_IXOSC	Protein held out wings, putative. (329 aa)
	B7QFN2_IXOSC	Bicaudal-C, putative. (695 aa)
	B7QHY1_IXOSC	Partner of Nob1, putative. (257 aa)
	B7QJ41_IXOSC	Uncharacterized protein. (246 aa)

Your Current Organism:

Ixodes scapularis

NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B7P3N6_IXOSC	B7P4K4_IXOSC	B7P3N6	B7P4K4	Transformation upregulated nuclear protein, putative.	Poly(Rc) binding protein, putative.	0.636
B7P3N6_IXOSC	B7PTM3_IXOSC	B7P3N6	B7PTM3	Transformation upregulated nuclear protein, putative.	Zinc finger protein, putative (Fragment).	0.401
B7P3N6_IXOSC	B7Q5M2_IXOSC	B7P3N6	B7Q5M2	Transformation upregulated nuclear protein, putative.	Protein held out wings, putative.	0.573
B7P4K4_IXOSC	B7P3N6_IXOSC	B7P4K4	B7P3N6	Poly(Rc) binding protein, putative.	Transformation upregulated nuclear protein, putative.	0.636
B7P4K4_IXOSC	B7PN34_IXOSC	B7P4K4	B7PN34	Poly(Rc) binding protein, putative.	KH domain RNA binding protein, putative (Fragment).	0.598
B7P4K4_IXOSC	B7Q368_IXOSC	B7P4K4	B7Q368	Poly(Rc) binding protein, putative.	High-density lipoprotein-binding protein, putative.	0.594
B7P4K4_IXOSC	B7Q3C5_IXOSC	B7P4K4	B7Q3C5	Poly(Rc) binding protein, putative.	Heterogeneous nuclear ribonucleoprotein k, putative.	0.636
B7P4K4_IXOSC	B7Q3I5_IXOSC	B7P4K4	B7Q3I5	Poly(Rc) binding protein, putative.	Uncharacterized protein.	0.480
B7P4K4_IXOSC	B7QFN2_IXOSC	B7P4K4	B7QFN2	Poly(Rc) binding protein, putative.	Bicaudal-C, putative.	0.455
B7P7L2_IXOSC	B7PY39_IXOSC	B7P7L2	B7PY39	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Rrp4, putative.	0.851
B7P7L2_IXOSC	B7QHY1_IXOSC	B7P7L2	B7QHY1	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Partner of Nob1, putative.	0.864
B7P8C3_IXOSC	B7PYP4_IXOSC	B7P8C3	B7PYP4	Polyribonucleotide nucleotidyltransferase, putative (Fragment).	Polyribonucleotide nucleotidyltransferase, putative (Fragment).	0.911
B7PN34_IXOSC	B7P4K4_IXOSC	B7PN34	B7P4K4	KH domain RNA binding protein, putative (Fragment).	Poly(Rc) binding protein, putative.	0.598
B7PN34_IXOSC	B7PTM3_IXOSC	B7PN34	B7PTM3	KH domain RNA binding protein, putative (Fragment).	Zinc finger protein, putative (Fragment).	0.425
B7PN34_IXOSC	B7PY39_IXOSC	B7PN34	B7PY39	KH domain RNA binding protein, putative (Fragment).	Rrp4, putative.	0.454
B7PN34_IXOSC	B7Q5M2_IXOSC	B7PN34	B7Q5M2	KH domain RNA binding protein, putative (Fragment).	Protein held out wings, putative.	0.628
B7PTM3_IXOSC	B7P3N6_IXOSC	B7PTM3	B7P3N6	Zinc finger protein, putative (Fragment).	Transformation upregulated nuclear protein, putative.	0.401
B7PTM3_IXOSC	B7PN34_IXOSC	B7PTM3	B7PN34	Zinc finger protein, putative (Fragment).	KH domain RNA binding protein, putative (Fragment).	0.425
B7PTM3_IXOSC	B7Q3C5_IXOSC	B7PTM3	B7Q3C5	Zinc finger protein, putative (Fragment).	Heterogeneous nuclear ribonucleoprotein k, putative.	0.401
B7PY39_IXOSC	B7P7L2_IXOSC	B7PY39	B7P7L2	Rrp4, putative.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.851