(5 nodes) 7S RNA binding network (Saprolegnia parasitica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPRG_20423	Uncharacterized protein. (509 aa)
	SPRG_06314	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (516 aa)
	SPRG_07722	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (589 aa)
	SPRG_03979	Uncharacterized protein. (295 aa)
	SPRG_00769	Uncharacterized protein. (243 aa)

Your Current Organism:

Saprolegnia parasitica

NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPRG_00769	SPRG_03979	A0A067D7V6	A0A067CX32	Uncharacterized protein.	Uncharacterized protein.	0.813
SPRG_00769	SPRG_06314	A0A067D7V6	A0A067CBZ0	Uncharacterized protein.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.962
SPRG_00769	SPRG_07722	A0A067D7V6	A0A067CCU6	Uncharacterized protein.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.955
SPRG_00769	SPRG_20423	A0A067D7V6	A0A067C7Y7	Uncharacterized protein.	Uncharacterized protein.	0.952
SPRG_03979	SPRG_00769	A0A067CX32	A0A067D7V6	Uncharacterized protein.	Uncharacterized protein.	0.813
SPRG_03979	SPRG_06314	A0A067CX32	A0A067CBZ0	Uncharacterized protein.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.977
SPRG_03979	SPRG_07722	A0A067CX32	A0A067CCU6	Uncharacterized protein.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.983
SPRG_03979	SPRG_20423	A0A067CX32	A0A067C7Y7	Uncharacterized protein.	Uncharacterized protein.	0.965
SPRG_06314	SPRG_00769	A0A067CBZ0	A0A067D7V6	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.962
SPRG_06314	SPRG_03979	A0A067CBZ0	A0A067CX32	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.977
SPRG_06314	SPRG_07722	A0A067CBZ0	A0A067CCU6	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.999
SPRG_06314	SPRG_20423	A0A067CBZ0	A0A067C7Y7	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.999
SPRG_07722	SPRG_00769	A0A067CCU6	A0A067D7V6	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	Uncharacterized protein.	0.955
SPRG_07722	SPRG_03979	A0A067CCU6	A0A067CX32	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	Uncharacterized protein.	0.983
SPRG_07722	SPRG_06314	A0A067CCU6	A0A067CBZ0	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.999
SPRG_07722	SPRG_20423	A0A067CCU6	A0A067C7Y7	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	Uncharacterized protein.	0.999
SPRG_20423	SPRG_00769	A0A067C7Y7	A0A067D7V6	Uncharacterized protein.	Uncharacterized protein.	0.952
SPRG_20423	SPRG_03979	A0A067C7Y7	A0A067CX32	Uncharacterized protein.	Uncharacterized protein.	0.965
SPRG_20423	SPRG_06314	A0A067C7Y7	A0A067CBZ0	Uncharacterized protein.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.999
SPRG_20423	SPRG_07722	A0A067C7Y7	A0A067CCU6	Uncharacterized protein.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.999