STRINGSTRING
SPRG_11996 SPRG_11996 SPRG_11777 SPRG_11777 SPRG_22241 SPRG_22241 SPRG_12485 SPRG_12485 SPRG_10729 SPRG_10729 SPRG_08312 SPRG_08312 SPRG_19901 SPRG_19901
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRG_11996Spindle pole body component. (755 aa)
SPRG_11777WD_REPEATS_REGION domain-containing protein. (461 aa)
SPRG_22241Tubulin domain-containing protein; Belongs to the tubulin family. (385 aa)
SPRG_12485Spindle pole body component. (934 aa)
SPRG_10729Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (449 aa)
SPRG_08312Uncharacterized protein. (412 aa)
SPRG_19901Spindle pole body component. (1079 aa)
Your Current Organism:
Saprolegnia parasitica
NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65
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