STRINGSTRING
SPRG_11296 SPRG_11296 SPRG_21242 SPRG_21242 SPRG_07658 SPRG_07658 SPRG_05966 SPRG_05966 SPRG_06670 SPRG_06670
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRG_11296E2_bind domain-containing protein. (458 aa)
SPRG_21242NEDD8-activating enzyme E1 regulatory subunit. (508 aa)
SPRG_07658UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (216 aa)
SPRG_05966Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (283 aa)
SPRG_06670UBIQUITIN_CONJUGAT_2 domain-containing protein. (230 aa)
Your Current Organism:
Saprolegnia parasitica
NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65
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