(10 nodes) G0 and Early G1, and E2F Family network (Saprolegnia parasitica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPRG_16947	Uncharacterized protein. (329 aa)
	SPRG_17349	Uncharacterized protein. (408 aa)
	SPRG_09081	CRC domain-containing protein. (415 aa)
	SPRG_08218	CRC domain-containing protein. (477 aa)
	SPRG_10205	CRC domain-containing protein. (309 aa)
	SPRG_09466	Integrase catalytic domain-containing protein. (208 aa)
	SPRG_08426	Uncharacterized protein. (906 aa)
	SPRG_07971	Uncharacterized protein. (401 aa)
	SPRG_04700	DIRP domain-containing protein. (507 aa)
	SPRG_02714	E2F_TDP domain-containing protein. (420 aa)

Your Current Organism:

Saprolegnia parasitica

NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPRG_02714	SPRG_04700	A0A067D0G3	A0A067CJ97	E2F_TDP domain-containing protein.	DIRP domain-containing protein.	0.952
SPRG_02714	SPRG_07971	A0A067D0G3	A0A067CID1	E2F_TDP domain-containing protein.	Uncharacterized protein.	0.986
SPRG_02714	SPRG_08218	A0A067D0G3	A0A067CB47	E2F_TDP domain-containing protein.	CRC domain-containing protein.	0.790
SPRG_02714	SPRG_08426	A0A067D0G3	A0A067CHR0	E2F_TDP domain-containing protein.	Uncharacterized protein.	0.999
SPRG_02714	SPRG_09081	A0A067D0G3	A0A067C9F4	E2F_TDP domain-containing protein.	CRC domain-containing protein.	0.790
SPRG_02714	SPRG_10205	A0A067D0G3	A0A067CD24	E2F_TDP domain-containing protein.	CRC domain-containing protein.	0.790
SPRG_02714	SPRG_17349	A0A067D0G3	A0A067BKK1	E2F_TDP domain-containing protein.	Uncharacterized protein.	0.985
SPRG_04700	SPRG_02714	A0A067CJ97	A0A067D0G3	DIRP domain-containing protein.	E2F_TDP domain-containing protein.	0.952
SPRG_04700	SPRG_07971	A0A067CJ97	A0A067CID1	DIRP domain-containing protein.	Uncharacterized protein.	0.852
SPRG_04700	SPRG_08218	A0A067CJ97	A0A067CB47	DIRP domain-containing protein.	CRC domain-containing protein.	0.913
SPRG_04700	SPRG_08426	A0A067CJ97	A0A067CHR0	DIRP domain-containing protein.	Uncharacterized protein.	0.980
SPRG_04700	SPRG_09081	A0A067CJ97	A0A067C9F4	DIRP domain-containing protein.	CRC domain-containing protein.	0.913
SPRG_04700	SPRG_09466	A0A067CJ97	A0A067CEK5	DIRP domain-containing protein.	Integrase catalytic domain-containing protein.	0.500
SPRG_04700	SPRG_10205	A0A067CJ97	A0A067CD24	DIRP domain-containing protein.	CRC domain-containing protein.	0.913
SPRG_04700	SPRG_16947	A0A067CJ97	A0A067BHK4	DIRP domain-containing protein.	Uncharacterized protein.	0.500
SPRG_04700	SPRG_17349	A0A067CJ97	A0A067BKK1	DIRP domain-containing protein.	Uncharacterized protein.	0.852
SPRG_07971	SPRG_02714	A0A067CID1	A0A067D0G3	Uncharacterized protein.	E2F_TDP domain-containing protein.	0.986
SPRG_07971	SPRG_04700	A0A067CID1	A0A067CJ97	Uncharacterized protein.	DIRP domain-containing protein.	0.852
SPRG_07971	SPRG_08218	A0A067CID1	A0A067CB47	Uncharacterized protein.	CRC domain-containing protein.	0.709
SPRG_07971	SPRG_08426	A0A067CID1	A0A067CHR0	Uncharacterized protein.	Uncharacterized protein.	0.977