STRINGSTRING
SPRG_10716 SPRG_10716 SPRG_16883 SPRG_16883 SPRG_10547 SPRG_10547 SPRG_17593 SPRG_17593 SPRG_12945 SPRG_12945 SPRG_16023 SPRG_16023 SPRG_10745 SPRG_10745 SPRG_10374 SPRG_10374 SPRG_10100 SPRG_10100 SPRG_10121 SPRG_10121 SPRG_07888 SPRG_07888 SPRG_07885 SPRG_07885 SPRG_06969 SPRG_06969 SPRG_06968 SPRG_06968 SPRG_01417 SPRG_01417 SPRG_04128 SPRG_04128 SPRG_02840 SPRG_02840 SPRG_06573 SPRG_06573 SPRG_00221 SPRG_00221
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRG_10716Uncharacterized protein. (230 aa)
SPRG_16883Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
SPRG_10547Histone H3; Belongs to the histone H3 family. (135 aa)
SPRG_17593Histone H3; Belongs to the histone H3 family. (131 aa)
SPRG_12945Histone domain-containing protein. (127 aa)
SPRG_16023Histone H2B; Belongs to the histone H2B family. (120 aa)
SPRG_10745Histone domain-containing protein. (70 aa)
SPRG_10374Uncharacterized protein. (230 aa)
SPRG_10100Histone H3; Belongs to the histone H3 family. (136 aa)
SPRG_10121Histone H2A; Belongs to the histone H2A family. (135 aa)
SPRG_07888Histone H3; Belongs to the histone H3 family. (136 aa)
SPRG_07885Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (101 aa)
SPRG_06969Histone H2B; Belongs to the histone H2B family. (119 aa)
SPRG_06968Histone H2A; Belongs to the histone H2A family. (135 aa)
SPRG_01417Histone H3; Belongs to the histone H3 family. (136 aa)
SPRG_04128Histone H2A; Belongs to the histone H2A family. (142 aa)
SPRG_02840Fe2OG dioxygenase domain-containing protein. (394 aa)
SPRG_06573Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
SPRG_00221Uncharacterized protein. (761 aa)
Your Current Organism:
Saprolegnia parasitica
NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65
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