(6 nodes) Cdc73/Paf1 complex network (Saprolegnia parasitica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPRG_17770	Uncharacterized protein. (492 aa)
	SPRG_06014	Uncharacterized protein. (407 aa)
	SPRG_05943	Uncharacterized protein. (432 aa)
	SPRG_15090	Uncharacterized protein. (395 aa)
	SPRG_14444	Uncharacterized protein. (1088 aa)
	SPRG_08594	Plus3 domain-containing protein. (693 aa)

Your Current Organism:

Saprolegnia parasitica

NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPRG_05943	SPRG_06014	A0A067CSA2	A0A067CJV3	Uncharacterized protein.	Uncharacterized protein.	0.999
SPRG_05943	SPRG_08594	A0A067CSA2	A0A067C576	Uncharacterized protein.	Plus3 domain-containing protein.	0.997
SPRG_05943	SPRG_14444	A0A067CSA2	A0A067BPA0	Uncharacterized protein.	Uncharacterized protein.	0.982
SPRG_05943	SPRG_15090	A0A067CSA2	A0A067BZN3	Uncharacterized protein.	Uncharacterized protein.	0.999
SPRG_05943	SPRG_17770	A0A067CSA2	A0A067BJ35	Uncharacterized protein.	Uncharacterized protein.	0.982
SPRG_06014	SPRG_05943	A0A067CJV3	A0A067CSA2	Uncharacterized protein.	Uncharacterized protein.	0.999
SPRG_06014	SPRG_08594	A0A067CJV3	A0A067C576	Uncharacterized protein.	Plus3 domain-containing protein.	0.997
SPRG_06014	SPRG_14444	A0A067CJV3	A0A067BPA0	Uncharacterized protein.	Uncharacterized protein.	0.981
SPRG_06014	SPRG_15090	A0A067CJV3	A0A067BZN3	Uncharacterized protein.	Uncharacterized protein.	0.999
SPRG_06014	SPRG_17770	A0A067CJV3	A0A067BJ35	Uncharacterized protein.	Uncharacterized protein.	0.981
SPRG_08594	SPRG_05943	A0A067C576	A0A067CSA2	Plus3 domain-containing protein.	Uncharacterized protein.	0.997
SPRG_08594	SPRG_06014	A0A067C576	A0A067CJV3	Plus3 domain-containing protein.	Uncharacterized protein.	0.997
SPRG_08594	SPRG_14444	A0A067C576	A0A067BPA0	Plus3 domain-containing protein.	Uncharacterized protein.	0.971
SPRG_08594	SPRG_15090	A0A067C576	A0A067BZN3	Plus3 domain-containing protein.	Uncharacterized protein.	0.997
SPRG_08594	SPRG_17770	A0A067C576	A0A067BJ35	Plus3 domain-containing protein.	Uncharacterized protein.	0.971
SPRG_14444	SPRG_05943	A0A067BPA0	A0A067CSA2	Uncharacterized protein.	Uncharacterized protein.	0.982
SPRG_14444	SPRG_06014	A0A067BPA0	A0A067CJV3	Uncharacterized protein.	Uncharacterized protein.	0.981
SPRG_14444	SPRG_08594	A0A067BPA0	A0A067C576	Uncharacterized protein.	Plus3 domain-containing protein.	0.971
SPRG_14444	SPRG_15090	A0A067BPA0	A0A067BZN3	Uncharacterized protein.	Uncharacterized protein.	0.979
SPRG_15090	SPRG_05943	A0A067BZN3	A0A067CSA2	Uncharacterized protein.	Uncharacterized protein.	0.999