(16 nodes) SCF ubiquitin ligase complex network (Saprolegnia parasitica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPRG_07455	Uncharacterized protein. (921 aa)
	SPRG_07561	Uncharacterized protein. (992 aa)
	SPRG_11654	RING-type domain-containing protein. (102 aa)
	SPRG_16998	Uncharacterized protein. (321 aa)
	SPRG_00595	Uncharacterized protein. (333 aa)
	SPRG_19203	Uncharacterized protein. (620 aa)
	SPRG_01150	Uncharacterized protein. (372 aa)
	SPRG_00940	Uncharacterized protein. (413 aa)
	SPRG_03988	Uncharacterized protein. (470 aa)
	SPRG_00858	Uncharacterized protein. (325 aa)
	SPRG_03928	Uncharacterized protein. (1087 aa)
	SPRG_00705	Uncharacterized protein. (390 aa)
	SPRG_04452	Uncharacterized protein. (322 aa)
	SPRG_05708	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (105 aa)
	SPRG_04726	Uncharacterized protein. (1709 aa)
	SPRG_04103	Uncharacterized protein. (379 aa)

Your Current Organism:

Saprolegnia parasitica

NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPRG_00595	SPRG_11654	A0A067D692	A0A067C2H1	Uncharacterized protein.	RING-type domain-containing protein.	0.426
SPRG_00705	SPRG_00858	A0A067CVX0	A0A067D720	Uncharacterized protein.	Uncharacterized protein.	0.494
SPRG_00705	SPRG_11654	A0A067CVX0	A0A067C2H1	Uncharacterized protein.	RING-type domain-containing protein.	0.426
SPRG_00858	SPRG_00705	A0A067D720	A0A067CVX0	Uncharacterized protein.	Uncharacterized protein.	0.494
SPRG_00858	SPRG_11654	A0A067D720	A0A067C2H1	Uncharacterized protein.	RING-type domain-containing protein.	0.689
SPRG_00940	SPRG_11654	A0A067D040	A0A067C2H1	Uncharacterized protein.	RING-type domain-containing protein.	0.426
SPRG_01150	SPRG_11654	A0A067D0R4	A0A067C2H1	Uncharacterized protein.	RING-type domain-containing protein.	0.689
SPRG_03988	SPRG_11654	A0A067CXX2	A0A067C2H1	Uncharacterized protein.	RING-type domain-containing protein.	0.426
SPRG_04103	SPRG_11654	A0A067CLB0	A0A067C2H1	Uncharacterized protein.	RING-type domain-containing protein.	0.426
SPRG_04452	SPRG_11654	A0A067CVJ5	A0A067C2H1	Uncharacterized protein.	RING-type domain-containing protein.	0.575
SPRG_04726	SPRG_11654	A0A067CNL4	A0A067C2H1	Uncharacterized protein.	RING-type domain-containing protein.	0.976
SPRG_05708	SPRG_11654	A0A067CQJ1	A0A067C2H1	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	RING-type domain-containing protein.	0.491
SPRG_07455	SPRG_11654	A0A067CKZ5	A0A067C2H1	Uncharacterized protein.	RING-type domain-containing protein.	0.426
SPRG_07561	SPRG_11654	A0A067CKJ4	A0A067C2H1	Uncharacterized protein.	RING-type domain-containing protein.	0.426
SPRG_11654	SPRG_00595	A0A067C2H1	A0A067D692	RING-type domain-containing protein.	Uncharacterized protein.	0.426
SPRG_11654	SPRG_00705	A0A067C2H1	A0A067CVX0	RING-type domain-containing protein.	Uncharacterized protein.	0.426
SPRG_11654	SPRG_00858	A0A067C2H1	A0A067D720	RING-type domain-containing protein.	Uncharacterized protein.	0.689
SPRG_11654	SPRG_00940	A0A067C2H1	A0A067D040	RING-type domain-containing protein.	Uncharacterized protein.	0.426
SPRG_11654	SPRG_01150	A0A067C2H1	A0A067D0R4	RING-type domain-containing protein.	Uncharacterized protein.	0.689
SPRG_11654	SPRG_03988	A0A067C2H1	A0A067CXX2	RING-type domain-containing protein.	Uncharacterized protein.	0.426