(10 nodes) Proteasome accessory complex network (Saprolegnia parasitica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPRG_02558	Uncharacterized protein. (239 aa)
	SPRG_19833	Uncharacterized protein. (183 aa)
	SPRG_06526	PCI domain-containing protein. (391 aa)
	SPRG_02599	Uncharacterized protein. (441 aa)
	SPRG_04948	Uncharacterized protein. (1063 aa)
	SPRG_01173	PCI domain-containing protein. (433 aa)
	SPRG_19533	Uncharacterized protein. (82 aa)
	SPRG_03850	Uncharacterized protein. (147 aa)
	SPRG_04213	CSN8_PSD8_EIF3K domain-containing protein. (267 aa)
	SPRG_04996	VWFA domain-containing protein. (349 aa)

Your Current Organism:

Saprolegnia parasitica

NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPRG_01173	SPRG_02558	A0A067D8Z3	A0A067CUD4	PCI domain-containing protein.	Uncharacterized protein.	0.803
SPRG_01173	SPRG_04213	A0A067D8Z3	A0A067CW42	PCI domain-containing protein.	CSN8_PSD8_EIF3K domain-containing protein.	0.999
SPRG_01173	SPRG_04948	A0A067D8Z3	A0A067CTM0	PCI domain-containing protein.	Uncharacterized protein.	0.523
SPRG_01173	SPRG_04996	A0A067D8Z3	A0A067CTX5	PCI domain-containing protein.	VWFA domain-containing protein.	0.999
SPRG_01173	SPRG_06526	A0A067D8Z3	A0A067CPH3	PCI domain-containing protein.	PCI domain-containing protein.	0.999
SPRG_01173	SPRG_19533	A0A067D8Z3	A0A067CXL5	PCI domain-containing protein.	Uncharacterized protein.	0.977
SPRG_02558	SPRG_01173	A0A067CUD4	A0A067D8Z3	Uncharacterized protein.	PCI domain-containing protein.	0.803
SPRG_02558	SPRG_04213	A0A067CUD4	A0A067CW42	Uncharacterized protein.	CSN8_PSD8_EIF3K domain-containing protein.	0.587
SPRG_02558	SPRG_04948	A0A067CUD4	A0A067CTM0	Uncharacterized protein.	Uncharacterized protein.	0.426
SPRG_02558	SPRG_04996	A0A067CUD4	A0A067CTX5	Uncharacterized protein.	VWFA domain-containing protein.	0.772
SPRG_02558	SPRG_06526	A0A067CUD4	A0A067CPH3	Uncharacterized protein.	PCI domain-containing protein.	0.600
SPRG_04213	SPRG_01173	A0A067CW42	A0A067D8Z3	CSN8_PSD8_EIF3K domain-containing protein.	PCI domain-containing protein.	0.999
SPRG_04213	SPRG_02558	A0A067CW42	A0A067CUD4	CSN8_PSD8_EIF3K domain-containing protein.	Uncharacterized protein.	0.587
SPRG_04213	SPRG_04948	A0A067CW42	A0A067CTM0	CSN8_PSD8_EIF3K domain-containing protein.	Uncharacterized protein.	0.577
SPRG_04213	SPRG_04996	A0A067CW42	A0A067CTX5	CSN8_PSD8_EIF3K domain-containing protein.	VWFA domain-containing protein.	0.999
SPRG_04213	SPRG_06526	A0A067CW42	A0A067CPH3	CSN8_PSD8_EIF3K domain-containing protein.	PCI domain-containing protein.	0.999
SPRG_04213	SPRG_19533	A0A067CW42	A0A067CXL5	CSN8_PSD8_EIF3K domain-containing protein.	Uncharacterized protein.	0.986
SPRG_04948	SPRG_01173	A0A067CTM0	A0A067D8Z3	Uncharacterized protein.	PCI domain-containing protein.	0.523
SPRG_04948	SPRG_02558	A0A067CTM0	A0A067CUD4	Uncharacterized protein.	Uncharacterized protein.	0.426
SPRG_04948	SPRG_04213	A0A067CTM0	A0A067CW42	Uncharacterized protein.	CSN8_PSD8_EIF3K domain-containing protein.	0.577