(9 nodes) K Homology domain network (Saprolegnia parasitica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPRG_02882	Uncharacterized protein. (553 aa)
	SPRG_08560	40S ribosomal protein. (235 aa)
	SPRG_11851	Uncharacterized protein. (265 aa)
	SPRG_14348	SET domain-containing protein. (371 aa)
	SPRG_15395	Uncharacterized protein. (521 aa)
	SPRG_13770	CCHC-type domain-containing protein. (541 aa)
	SPRG_02598	Uncharacterized protein. (1279 aa)
	SPRG_02415	KH domain-containing protein. (232 aa)
	SPRG_06133	Polyribonucleotide nucleotidyltransferase. (856 aa)

Your Current Organism:

Saprolegnia parasitica

NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPRG_02415	SPRG_08560	A0A067D125	A0A067C6V1	KH domain-containing protein.	40S ribosomal protein.	0.984
SPRG_02415	SPRG_11851	A0A067D125	A0A067C1K3	KH domain-containing protein.	Uncharacterized protein.	0.644
SPRG_02415	SPRG_14348	A0A067D125	A0A067BU90	KH domain-containing protein.	SET domain-containing protein.	0.639
SPRG_06133	SPRG_08560	A0A067CF03	A0A067C6V1	Polyribonucleotide nucleotidyltransferase.	40S ribosomal protein.	0.555
SPRG_08560	SPRG_02415	A0A067C6V1	A0A067D125	40S ribosomal protein.	KH domain-containing protein.	0.984
SPRG_08560	SPRG_06133	A0A067C6V1	A0A067CF03	40S ribosomal protein.	Polyribonucleotide nucleotidyltransferase.	0.555
SPRG_08560	SPRG_15395	A0A067C6V1	A0A067BLH8	40S ribosomal protein.	Uncharacterized protein.	0.510
SPRG_11851	SPRG_02415	A0A067C1K3	A0A067D125	Uncharacterized protein.	KH domain-containing protein.	0.644
SPRG_11851	SPRG_14348	A0A067C1K3	A0A067BU90	Uncharacterized protein.	SET domain-containing protein.	0.999
SPRG_14348	SPRG_02415	A0A067BU90	A0A067D125	SET domain-containing protein.	KH domain-containing protein.	0.639
SPRG_14348	SPRG_11851	A0A067BU90	A0A067C1K3	SET domain-containing protein.	Uncharacterized protein.	0.999
SPRG_15395	SPRG_08560	A0A067BLH8	A0A067C6V1	Uncharacterized protein.	40S ribosomal protein.	0.510