(23 nodes) AAA ATPase, AAA+ lid domain network (Saprolegnia parasitica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPRG_14094	AAA domain-containing protein; Belongs to the AAA ATPase family. (392 aa)
	SPRG_18416	Uncharacterized protein; Belongs to the AAA ATPase family. (131 aa)
	SPRG_18086	Uncharacterized protein; Belongs to the AAA ATPase family. (135 aa)
	SPRG_13402	AAA domain-containing protein; Belongs to the AAA ATPase family. (430 aa)
	SPRG_07339	AAA domain-containing protein; Belongs to the AAA ATPase family. (684 aa)
	SPRG_14110	Uncharacterized protein; Belongs to the AAA ATPase family. (610 aa)
	SPRG_14264	26S protease regulatory subunit 6A A; Belongs to the AAA ATPase family. (437 aa)
	SPRG_08917	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (438 aa)
	SPRG_07116	AAA domain-containing protein; Belongs to the AAA ATPase family. (584 aa)
	SPRG_06769	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (405 aa)
	SPRG_02183	Uncharacterized protein. (510 aa)
	SPRG_00500	Uncharacterized protein. (794 aa)
	SPRG_00678	Cell division cycle protein 48; Belongs to the AAA ATPase family. (803 aa)
	SPRG_19339	Uncharacterized protein; Belongs to the AAA ATPase family. (519 aa)
	SPRG_01051	AAA domain-containing protein; Belongs to the AAA ATPase family. (418 aa)
	SPRG_04433	Bromo domain-containing protein. (1489 aa)
	SPRG_01475	AAA domain-containing protein; Belongs to the AAA ATPase family. (267 aa)
	KATNAL2	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. (520 aa)
	KATNA1	Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays. (559 aa)
	SPRG_05106	AAA domain-containing protein; Belongs to the AAA ATPase family. (563 aa)
	SPRG_07396	26S proteasome regulatory subunit 4 A; Belongs to the AAA ATPase family. (440 aa)
	SPRG_07350	Uncharacterized protein. (767 aa)
	SPRG_03909	AAA domain-containing protein. (832 aa)

Your Current Organism:

Saprolegnia parasitica

NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KATNA1	SPRG_02183	A0A067CQN1	A0A067D3R1	Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.	Uncharacterized protein.	0.417
KATNA1	SPRG_06769	A0A067CQN1	A0A067CC77	Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	0.670
KATNA1	SPRG_14264	A0A067CQN1	A0A067C1Q7	Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.	26S protease regulatory subunit 6A A; Belongs to the AAA ATPase family.	0.686
KATNA1	SPRG_18416	A0A067CQN1	A0A067BH23	Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.679
KATNA1	SPRG_19339	A0A067CQN1	A0A067CWX1	Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.416
KATNAL2	SPRG_01051	A0A067CUG2	A0A067CWU2	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.463
KATNAL2	SPRG_04433	A0A067CUG2	A0A067CUR4	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Bromo domain-containing protein.	0.445
KATNAL2	SPRG_06769	A0A067CUG2	A0A067CC77	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	0.930
KATNAL2	SPRG_14264	A0A067CUG2	A0A067C1Q7	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	26S protease regulatory subunit 6A A; Belongs to the AAA ATPase family.	0.932
KATNAL2	SPRG_18086	A0A067CUG2	A0A067BNW1	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.584
KATNAL2	SPRG_18416	A0A067CUG2	A0A067BH23	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.932
KATNAL2	SPRG_19339	A0A067CUG2	A0A067CWX1	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.409
SPRG_00500	SPRG_01475	A0A067D2K8	A0A067CUG4	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.601
SPRG_00500	SPRG_05106	A0A067D2K8	A0A067CMD4	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.406
SPRG_00500	SPRG_06769	A0A067D2K8	A0A067CC77	Uncharacterized protein.	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	0.598
SPRG_00500	SPRG_07396	A0A067D2K8	A0A067CLV7	Uncharacterized protein.	26S proteasome regulatory subunit 4 A; Belongs to the AAA ATPase family.	0.663
SPRG_00500	SPRG_08917	A0A067D2K8	A0A067C524	Uncharacterized protein.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.561
SPRG_00500	SPRG_14264	A0A067D2K8	A0A067C1Q7	Uncharacterized protein.	26S protease regulatory subunit 6A A; Belongs to the AAA ATPase family.	0.616
SPRG_00500	SPRG_18086	A0A067D2K8	A0A067BNW1	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.553
SPRG_00500	SPRG_18416	A0A067D2K8	A0A067BH23	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.600