(31 nodes) Chromosome Maintenance network (Saprolegnia parasitica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPRG_01897	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (601 aa)
	SPRG_02383	ATP-dependent DNA helicase; Belongs to the helicase family. (120 aa)
	SPRG_08328	Uncharacterized protein. (524 aa)
	SPRG_06997	Uncharacterized protein. (98 aa)
	SPRG_07272	Uncharacterized protein. (352 aa)
	SPRG_20614	ATP-dependent DNA helicase; Belongs to the helicase family. (563 aa)
	SPRG_10010	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (536 aa)
	SPRG_13157	Uncharacterized protein. (1082 aa)
	SPRG_10055	3'-5' exonuclease domain-containing protein. (366 aa)
	SPRG_10939	Replication protein A subunit. (627 aa)
	SPRG_12082	RuvB-like helicase; Belongs to the RuvB family. (447 aa)
	SPRG_11835	Mis18 domain-containing protein. (175 aa)
	SPRG_16023	Histone H2B; Belongs to the histone H2B family. (120 aa)
	SPRG_11316	HD domain-containing protein. (238 aa)
	SPRG_18007	Uncharacterized protein. (51 aa)
	SPRG_21836	ATP-dependent DNA helicase; Belongs to the helicase family. (271 aa)
	SPRG_18023	Uncharacterized protein. (217 aa)
	SPRG_05700	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (144 aa)
	SPRG_01591	H/ACA ribonucleoprotein complex subunit 3. (65 aa)
	SPRG_01798	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (806 aa)
	SPRG_01797	Uncharacterized protein. (135 aa)
	SPRG_00320	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (432 aa)
	SPRG_06969	Histone H2B; Belongs to the histone H2B family. (119 aa)
	SPRG_05225	Uncharacterized protein. (110 aa)
	SPRG_04128	Histone H2A; Belongs to the histone H2A family. (142 aa)
	SPRG_06361	TruB_N domain-containing protein. (273 aa)
	SPRG_02355	Uncharacterized protein. (592 aa)
	SPRG_02953	AAA domain-containing protein. (769 aa)
	SPRG_00273	H/ACA ribonucleoprotein complex subunit 4. (464 aa)
	SPRG_19003	SHQ1 domain-containing protein. (470 aa)
	SPRG_20323	RuvB-like helicase. (420 aa)

Your Current Organism:

Saprolegnia parasitica

NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPRG_00273	SPRG_01591	A0A067D1P2	A0A067CS39	H/ACA ribonucleoprotein complex subunit 4.	H/ACA ribonucleoprotein complex subunit 3.	0.985
SPRG_00273	SPRG_05225	A0A067D1P2	A0A067CLE2	H/ACA ribonucleoprotein complex subunit 4.	Uncharacterized protein.	0.879
SPRG_00273	SPRG_05700	A0A067D1P2	A0A067CQH1	H/ACA ribonucleoprotein complex subunit 4.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.994
SPRG_00273	SPRG_12082	A0A067D1P2	A0A067BZ18	H/ACA ribonucleoprotein complex subunit 4.	RuvB-like helicase; Belongs to the RuvB family.	0.843
SPRG_00273	SPRG_19003	A0A067D1P2	A0A067D578	H/ACA ribonucleoprotein complex subunit 4.	SHQ1 domain-containing protein.	0.978
SPRG_00273	SPRG_20323	A0A067D1P2	A0A067CKP5	H/ACA ribonucleoprotein complex subunit 4.	RuvB-like helicase.	0.787
SPRG_00320	SPRG_02953	A0A067CY79	A0A067D114	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	AAA domain-containing protein.	0.522
SPRG_00320	SPRG_05225	A0A067CY79	A0A067CLE2	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Uncharacterized protein.	0.418
SPRG_00320	SPRG_10055	A0A067CY79	A0A067C441	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	3'-5' exonuclease domain-containing protein.	0.505
SPRG_00320	SPRG_10939	A0A067CY79	A0A067BZ50	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Replication protein A subunit.	0.853
SPRG_01591	SPRG_00273	A0A067CS39	A0A067D1P2	H/ACA ribonucleoprotein complex subunit 3.	H/ACA ribonucleoprotein complex subunit 4.	0.985
SPRG_01591	SPRG_05225	A0A067CS39	A0A067CLE2	H/ACA ribonucleoprotein complex subunit 3.	Uncharacterized protein.	0.860
SPRG_01591	SPRG_05700	A0A067CS39	A0A067CQH1	H/ACA ribonucleoprotein complex subunit 3.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.999
SPRG_01591	SPRG_06361	A0A067CS39	A0A067CP59	H/ACA ribonucleoprotein complex subunit 3.	TruB_N domain-containing protein.	0.985
SPRG_01591	SPRG_12082	A0A067CS39	A0A067BZ18	H/ACA ribonucleoprotein complex subunit 3.	RuvB-like helicase; Belongs to the RuvB family.	0.627
SPRG_01591	SPRG_19003	A0A067CS39	A0A067D578	H/ACA ribonucleoprotein complex subunit 3.	SHQ1 domain-containing protein.	0.951
SPRG_01591	SPRG_20323	A0A067CS39	A0A067CKP5	H/ACA ribonucleoprotein complex subunit 3.	RuvB-like helicase.	0.611
SPRG_01797	SPRG_02953	A0A067CTS7	A0A067D114	Uncharacterized protein.	AAA domain-containing protein.	0.522
SPRG_01797	SPRG_05225	A0A067CTS7	A0A067CLE2	Uncharacterized protein.	Uncharacterized protein.	0.418
SPRG_01797	SPRG_10055	A0A067CTS7	A0A067C441	Uncharacterized protein.	3'-5' exonuclease domain-containing protein.	0.505