STRINGSTRING
SPRG_05700 SPRG_05700 SPRG_16960 SPRG_16960 SPRG_14646 SPRG_14646 SPRG_14087 SPRG_14087 SPRG_14147 SPRG_14147 SPRG_13658 SPRG_13658 SPRG_07998 SPRG_07998 SPRG_05257 SPRG_05257 SPRG_04028 SPRG_04028
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRG_05700Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (144 aa)
SPRG_16960Ribosomal_L7Ae domain-containing protein. (169 aa)
SPRG_14646Ribosomal_L7Ae domain-containing protein. (530 aa)
SPRG_14087Ribosomal_L7Ae domain-containing protein. (169 aa)
SPRG_1414760S ribosomal protein L30. (110 aa)
SPRG_13658Ribosomal_L7Ae domain-containing protein. (272 aa)
SPRG_07998Ribosomal_L7Ae domain-containing protein. (279 aa)
SPRG_0525740S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (134 aa)
SPRG_04028Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
Your Current Organism:
Saprolegnia parasitica
NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65
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