STRINGSTRING
BARCL_0037 BARCL_0037 batS batS batR batR BARCL_0275 BARCL_0275 BARCL_0294 BARCL_0294 ctrA ctrA envZ envZ ompR ompR trkH trkH BARCL_0362 BARCL_0362 BARCL_0383 BARCL_0383 feuP feuP feuQ feuQ BARCL_0386 BARCL_0386 BARCL_0393 BARCL_0393 BARCL_0394 BARCL_0394 BARCL_0398 BARCL_0398 flhA flhA fliR fliR BARCL_0446 BARCL_0446 BARCL_0447 BARCL_0447 BARCL_0448 BARCL_0448 BARCL_0449 BARCL_0449 BARCL_0450 BARCL_0450 BARCL_0451 BARCL_0451 flhB flhB BARCL_0453 BARCL_0453 fliY fliY BARCL_0455 BARCL_0455 fliM fliM motA motA BARCL_0458 BARCL_0458 flgF flgF fliI fliI BARCL_0461 BARCL_0461 flgB flgB flgC flgC fliE fliE flgG flgG flgA flgA flgI flgI BARCL_0468 BARCL_0468 flgH flgH fliL fliL fliP fliP fliF fliF BARCL_0478 BARCL_0478 BARCL_0479 BARCL_0479 BARCL_0480 BARCL_0480 BARCL_0481 BARCL_0481 BARCL_0482 BARCL_0482 ftcR ftcR flgE flgE flgK flgK BARCL_0486 BARCL_0486 flaF flaF flbT flbT BARCL_0489 BARCL_0489 fliQ fliQ slt slt BARCL_0601 BARCL_0601 BARCL_0602 BARCL_0602 BARCL_0603 BARCL_0603 trkA trkA BARCL_0605 BARCL_0605 BARCL_0700 BARCL_0700 divK divK BARCL_0849 BARCL_0849 BARCL_1008 BARCL_1008 BARCL_1034 BARCL_1034 BARCL_1092 BARCL_1092 BARCL_1161 BARCL_1161 mtrA mtrA BARCL_1336 BARCL_1336
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BARCL_0037Putative sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (825 aa)
batSTwo-component sensor kinase BatS. (590 aa)
batRTranscriptional regulator BatR. (240 aa)
BARCL_0275Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (399 aa)
BARCL_0294Homologs of previously reported genes of unknown function. (212 aa)
ctrACell cycle transcriptional regulator CtrA. (233 aa)
envZSensor histidine kinase. (446 aa)
ompRTranscriptional regulator OmpR. (233 aa)
trkHTrk system potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. (464 aa)
BARCL_0362Homologs of previously reported genes of unknown function. (961 aa)
BARCL_0383Homologs of previously reported genes of unknown function. (77 aa)
feuPTwo-component system regulatory protein. (222 aa)
feuQSensor histidine kinase. (469 aa)
BARCL_0386Protein of unknown function; No homology to any previously reported sequences. (62 aa)
BARCL_0393Two-component response regulator. (228 aa)
BARCL_0394Sensor histidine kinase. (463 aa)
BARCL_0398Two-component sensor histidine kinase. (769 aa)
flhAFlagellar biosynthesis protein flhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (699 aa)
fliRFlagellar biosynthetic protein FliR. (259 aa)
BARCL_0446Homologs of previously reported genes of unknown function. (129 aa)
BARCL_0447Homologs of previously reported genes of unknown function. (172 aa)
BARCL_0448Homologs of previously reported genes of unknown function. (147 aa)
BARCL_0449Homologs of previously reported genes of unknown function. (152 aa)
BARCL_0450Protein of unknown function; No homology to any previously reported sequences. (45 aa)
BARCL_0451Homologs of previously reported genes of unknown function. (141 aa)
flhBFlagellar biosynthetic protein flhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (356 aa)
BARCL_0453Putative flagellar motor switch protein FliG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (360 aa)
fliYFlagellar motor switch protein fliY; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (171 aa)
BARCL_0455Homologs of previously reported genes of unknown function. (151 aa)
fliMFlagellar motor switch protein FliM. (322 aa)
motAChemotaxis protein motA (Motility protein A). (291 aa)
BARCL_0458Homologs of previously reported genes of unknown function. (266 aa)
flgFFlagellar basal-body rod protein flgF. (244 aa)
fliIFlagellum-specific ATP synthase. (514 aa)
BARCL_0461Protein of unknown function; No homology to any previously reported sequences. (20 aa)
flgBFlagellar basal-body rod protein flgB. (128 aa)
flgCFlagellar basal-body rod protein flgC; Belongs to the flagella basal body rod proteins family. (138 aa)
fliEFlagellar hook-basal body complex protein fliE. (126 aa)
flgGFlagellar basal-body rod protein flgG (Distal rod protein); Belongs to the flagella basal body rod proteins family. (264 aa)
flgAFlagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (152 aa)
flgIFlagellar P-ring protein precursor (Basal body P-ring protein); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (414 aa)
BARCL_0468Homologs of previously reported genes of unknown function. (238 aa)
flgHFlagellar L-ring protein precursor (Basal body L-ring protein); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (210 aa)
fliLFlagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (166 aa)
fliPFlagellar biosynthetic protein fliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (250 aa)
fliFFlagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (557 aa)
BARCL_0478Homologs of previously reported genes of unknown function. (253 aa)
BARCL_0479Putative flagellar motor protein MotB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (384 aa)
BARCL_0480Putative flagellar motor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (428 aa)
BARCL_0481Putative flagellar motor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (408 aa)
BARCL_0482Transglycosylase, SLT domain protein. (171 aa)
ftcRFlagellar transcriptional regulator ftcR. (229 aa)
flgEFlagellar hook protein FlgE. (402 aa)
flgKFlagellar hook-associated protein FlgK. (456 aa)
BARCL_0486Putative flagellar hook-associated protein 3 (HAP3); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (360 aa)
flaFFlaf protein. (122 aa)
flbTPutative flagellum biosynthesis repressor protein flbT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (147 aa)
BARCL_0489Flagellar hook capping protein (fragment). (169 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (88 aa)
sltFragment of Bartonella effector protein (Bep); Gene remnant; factor. (704 aa)
BARCL_0601Homologs of previously reported genes of unknown function. (159 aa)
BARCL_0602Two-component system, sensor histidine kinase. (756 aa)
BARCL_0603Two-component system, response regulator. (452 aa)
trkAPotassium uptake protein TrkA. (458 aa)
BARCL_0605Homologs of previously reported genes of unknown function. (268 aa)
BARCL_0700Sensor histidine kinase. (854 aa)
divKTwo-component system response regulator. (121 aa)
BARCL_0849Response regulator. (120 aa)
BARCL_1008Transmembrane protein. (172 aa)
BARCL_1034Fragment of Bartonella effector protein (Bep); Gene remnant; factor. (367 aa)
BARCL_1092Sigma factor-dependent DNA-binding response regulator. (460 aa)
BARCL_1161Two-component system response regulator. (264 aa)
mtrATwo-component response regulator. (227 aa)
BARCL_1336Homologs of previously reported genes of unknown function. (185 aa)
Your Current Organism:
Bartonella clarridgeiae
NCBI taxonomy Id: 696125
Other names: B. clarridgeiae 73, Bartonella clarridgeiae 73, Bartonella clarridgeiae str. 73, Bartonella clarridgeiae strain 73
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