STRINGSTRING
AEG58328.1 AEG58328.1 AEG58465.1 AEG58465.1 AEG58655.1 AEG58655.1 AEG58880.1 AEG58880.1 AEG59017.1 AEG59017.1 AEG59028.1 AEG59028.1 AEG60177.1 AEG60177.1 AEG60504.1 AEG60504.1 AEG60617.1 AEG60617.1 pheA pheA AEG61040.1 AEG61040.1 AEG61045.1 AEG61045.1 AEG61140.1 AEG61140.1 AEG61142.1 AEG61142.1 AEG61143.1 AEG61143.1 AEG61476.1 AEG61476.1 AEG61564.1 AEG61564.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEG58328.1TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: drm:Dred_0014 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein. (526 aa)
AEG58465.1KEGG: drm:Dred_0097 threonine dehydratase; TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein. (404 aa)
AEG58655.1TIGRFAM: acetolactate synthase, small subunit; KEGG: drm:Dred_0282 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein. (170 aa)
AEG58880.1PFAM: malic protein NAD-binding; malic protein domain protein; amino acid-binding ACT domain protein; KEGG: drm:Dred_2955 malate dehydrogenase. (475 aa)
AEG59017.1KEGG: drm:Dred_2896 acetolactate synthase 3 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein. (171 aa)
AEG59028.1PFAM: amino acid-binding ACT domain protein; KEGG: drm:Dred_2883 amino acid-binding ACT domain-containing protein. (143 aa)
AEG60177.1KEGG: drm:Dred_1940 aspartate kinase I; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family. (411 aa)
AEG60504.1TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; amino acid-binding ACT domain protein; KEGG: dhd:Dhaf_1326 putative sigma54 specific transcriptional regulator; SMART: PAS domain containing protein; AAA ATPase. (538 aa)
AEG60617.1PFAM: amino acid-binding ACT domain protein; KEGG: drm:Dred_1671 hypothetical protein; Belongs to the UPF0237 family. (100 aa)
pheAKEGG: dau:Daud_1904 prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein. (279 aa)
AEG61040.1KEGG: drm:Dred_1256 signal-transduction protein; PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; SMART: CBS domain containing protein. (210 aa)
AEG61045.1TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; KEGG: drm:Dred_1252 L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein. (220 aa)
AEG61140.1KEGG: drm:Dred_1167 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family. (404 aa)
AEG61142.1KEGG: drm:Dred_1165 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein. (430 aa)
AEG61143.1PFAM: amino acid-binding ACT domain protein; KEGG: drm:Dred_1164 hypothetical protein; Belongs to the UPF0735 family. (148 aa)
AEG61476.1RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (723 aa)
AEG61564.1TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; KEGG: drm:Dred_0663 putative PAS/PAC sensor protein; SMART: AAA ATPase; PAS domain containing protein. (526 aa)
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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