STRINGSTRING
ADU21543.1 ADU21543.1 ADU20676.1 ADU20676.1 hisC hisC ADU20944.1 ADU20944.1 ADU20946.1 ADU20946.1 ADU21422.1 ADU21422.1 ADU21437.1 ADU21437.1 ADU21478.1 ADU21478.1 ADU21516.1 ADU21516.1 serC serC ADU21552.1 ADU21552.1 ADU21738.1 ADU21738.1 dapL dapL ADU22184.1 ADU22184.1 iscS iscS ADU22241.1 ADU22241.1 glyA glyA argD argD ADU22908.1 ADU22908.1 ADU22921.1 ADU22921.1 ADU23066.1 ADU23066.1 ADU23145.1 ADU23145.1 ADU23228.1 ADU23228.1 ADU23405.1 ADU23405.1 ADU23441.1 ADU23441.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADU21543.1PFAM: aminotransferase class I and II; KEGG: bad:BAD_0831 bifunctional HTH-domain containing protein/aminotransferase. (405 aa)
ADU20676.1Cysteine desulfurase; KEGG: cth:Cthe_1064 aminotransferase, class V; PFAM: aminotransferase class V. (379 aa)
hisCKEGG: eel:EUBELI_00629 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (355 aa)
ADU20944.1PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: pmo:Pmob_0937 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (386 aa)
ADU20946.1KEGG: dps:DP0041 hypothetical protein. (317 aa)
ADU21422.1Cysteine desulfurase; KEGG: cpy:Cphy_0181 aminotransferase class V; PFAM: aminotransferase class V. (371 aa)
ADU21437.1Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: eel:EUBELI_00180 hypothetical protein. (397 aa)
ADU21478.1Putative transcriptional regulator, GntR family; KEGG: eel:EUBELI_01118 aspartate aminotransferase. (426 aa)
ADU21516.1PFAM: Aluminium resistance family protein; KEGG: cth:Cthe_0794 aluminium resistance protein. (422 aa)
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (361 aa)
ADU21552.1KEGG: tjr:TherJR_3003 cysteine desulfurase family protein; PFAM: aminotransferase class V. (379 aa)
ADU21738.1PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: cpy:Cphy_3055 Orn/Lys/Arg decarboxylase major region. (481 aa)
dapLLL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. (394 aa)
ADU22184.1KEGG: tva:TVAG_258770 adenosylmethionine-8-amino-7-oxononanoate aminotransferase family protein; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (400 aa)
iscSCysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. (403 aa)
ADU22241.1PFAM: aminotransferase class I and II; KEGG: ere:EUBREC_3003 aspartate aminotransferase. (393 aa)
glyAGlycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (415 aa)
argDKEGG: brm:Bmur_0540 acetylornithine and succinylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (393 aa)
ADU22908.1Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (409 aa)
ADU22921.1PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: fsu:Fisuc_1079 cystathionine gamma-synthase. (391 aa)
ADU23066.1TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: eel:EUBELI_20370 O-acetylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein. (432 aa)
ADU23145.1PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cth:Cthe_1569 O-acetylhomoserine aminocarboxypropyltransferase. (429 aa)
ADU23228.1Arginine decarboxylase; KEGG: mla:Mlab_1037 hypothetical protein; PFAM: Orn/Lys/Arg decarboxylase major region. (447 aa)
ADU23405.1TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: cbt:CLH_0332 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein. (422 aa)
ADU23441.1PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: blo:BL1559 cystathionine gamma lyase. (399 aa)
Your Current Organism:
Ruminococcus albus 7 DSM 20455
NCBI taxonomy Id: 697329
Other names: R. albus 7 = DSM 20455, Ruminococcus albus 7, Ruminococcus albus 7 = DSM 20455, Ruminococcus albus DSM 20455, Ruminococcus albus DSM 20455 = 7
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