35 items (Saitoella complicata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Your Input:
	G7K_2930-t1	DNA ligase. (813 aa)
	G7K_2684-t1	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (407 aa)
	G7K_2053-t1	Uncharacterized protein. (485 aa)
	G7K_1479-t1	Uncharacterized protein. (713 aa)
	G7K_1043-t1	Uncharacterized protein. (499 aa)
	G7K_1454-t1	Reverse transcriptase domain-containing protein. (773 aa)
	G7K_1291-t1	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1108 aa)
	G7K_1075-t1	DNA polymerase. (1610 aa)
	G7K_1040-t1	AAA_23 domain-containing protein. (1309 aa)
	G7K_0687-t1	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2222 aa)
	G7K_0070-t1	DNA ligase. (963 aa)
	G7K_0070-t2	DNA ligase. (969 aa)
	G7K_0057-t1	DNA polymerase. (1257 aa)
	G7K_4170-t1	Telomere_reg-2 domain-containing protein. (872 aa)
	G7K_4791-t1	Uncharacterized protein. (489 aa)
	G7K_5792-t1	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (320 aa)
	G7K_5837-t1	RT_RNaseH_2 domain-containing protein. (216 aa)
	G7K_5808-t1	Vezatin domain-containing protein. (676 aa)
	G7K_6622-t1	Uncharacterized protein. (2153 aa)
	G7K_4032-t1	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (604 aa)
	G7K_6779-t1	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2430 aa)
	G7K_4481-t1	UmuC domain-containing protein. (598 aa)
	G7K_4042-t1	DNA_pol_E_B domain-containing protein. (830 aa)
	G7K_4184-t1	POLAc domain-containing protein. (1175 aa)
	G7K_3889-t1	WLM domain-containing protein. (954 aa)
	G7K_3847-t1	Uncharacterized protein. (1534 aa)
	G7K_3895-t1	Uncharacterized protein. (1931 aa)
	G7K_3670-t1	Uncharacterized protein. (196 aa)
	G7K_3408-t1	Uncharacterized protein. (927 aa)
	G7K_3807-t1	DNA polymerase. (1132 aa)
	G7K_3641-t1	HORMA domain-containing protein. (243 aa)
	G7K_3390-t1	DNA_LIGASE_A3 domain-containing protein. (924 aa)
	G7K_3509-t1	BRCT domain-containing protein. (883 aa)
	G7K_3465-t1	UmuC domain-containing protein. (680 aa)
	G7K_2753-t1	DNA ligase. (905 aa)

Your Current Organism:

Saitoella complicata

NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G7K_0057-t1	G7K_0070-t1	A0A0E9N792	A0A0E9N8U3	DNA polymerase.	DNA ligase.	0.665
G7K_0057-t1	G7K_0070-t2	A0A0E9N792	A0A0E9N7X2	DNA polymerase.	DNA ligase.	0.665
G7K_0057-t1	G7K_0687-t1	A0A0E9N792	A0A0E9N9S9	DNA polymerase.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.979
G7K_0057-t1	G7K_1040-t1	A0A0E9N792	A0A0E9NAA9	DNA polymerase.	AAA_23 domain-containing protein.	0.800
G7K_0057-t1	G7K_1043-t1	A0A0E9N792	A0A0E9NBQ2	DNA polymerase.	Uncharacterized protein.	0.992
G7K_0057-t1	G7K_1075-t1	A0A0E9N792	A0A0E9NAE4	DNA polymerase.	DNA polymerase.	0.928
G7K_0057-t1	G7K_1479-t1	A0A0E9N792	A0A0E9NBQ3	DNA polymerase.	Uncharacterized protein.	0.439
G7K_0057-t1	G7K_2684-t1	A0A0E9N792	A0A0E9NFQ0	DNA polymerase.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.725
G7K_0057-t1	G7K_2753-t1	A0A0E9N792	A0A0E9NGP5	DNA polymerase.	DNA ligase.	0.876
G7K_0057-t1	G7K_2930-t1	A0A0E9N792	A0A0E9NGC8	DNA polymerase.	DNA ligase.	0.876
G7K_0057-t1	G7K_3390-t1	A0A0E9N792	A0A0E9NHQ8	DNA polymerase.	DNA_LIGASE_A3 domain-containing protein.	0.641
G7K_0057-t1	G7K_3465-t1	A0A0E9N792	A0A0E9NHJ8	DNA polymerase.	UmuC domain-containing protein.	0.777
G7K_0057-t1	G7K_3509-t1	A0A0E9N792	A0A0E9NHQ1	DNA polymerase.	BRCT domain-containing protein.	0.736
G7K_0057-t1	G7K_3641-t1	A0A0E9N792	A0A0E9NI00	DNA polymerase.	HORMA domain-containing protein.	0.907
G7K_0057-t1	G7K_3670-t1	A0A0E9N792	A0A0E9NIM1	DNA polymerase.	Uncharacterized protein.	0.809
G7K_0057-t1	G7K_3847-t1	A0A0E9N792	A0A0E9NJ27	DNA polymerase.	Uncharacterized protein.	0.786
G7K_0057-t1	G7K_4032-t1	A0A0E9N792	A0A0E9NKH8	DNA polymerase.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.921
G7K_0057-t1	G7K_4042-t1	A0A0E9N792	A0A0E9NJQ2	DNA polymerase.	DNA_pol_E_B domain-containing protein.	0.964
G7K_0057-t1	G7K_4184-t1	A0A0E9N792	A0A0E9NJM6	DNA polymerase.	POLAc domain-containing protein.	0.543
G7K_0057-t1	G7K_4481-t1	A0A0E9N792	A0A0E9NKH6	DNA polymerase.	UmuC domain-containing protein.	0.896

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