38 items (Saitoella complicata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G7K_4169-t1	Uncharacterized protein. (137 aa)
	G7K_4042-t1	DNA_pol_E_B domain-containing protein. (830 aa)
	G7K_3982-t1	Uncharacterized protein. (432 aa)
	G7K_4032-t1	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (604 aa)
	G7K_4466-t1	AAA domain-containing protein. (348 aa)
	G7K_4517-t1	Uncharacterized protein. (347 aa)
	G7K_4791-t1	Uncharacterized protein. (489 aa)
	G7K_4551-t1	Uncharacterized protein. (534 aa)
	G7K_5060-t1	Uncharacterized protein. (282 aa)
	G7K_6304-t1	RING-type domain-containing protein. (212 aa)
	G7K_5074-t1	Uncharacterized protein. (430 aa)
	G7K_5082-t1	Uncharacterized protein. (609 aa)
	G7K_5340-t1	AAA domain-containing protein. (457 aa)
	G7K_5677-t1	Uncharacterized protein. (602 aa)
	G7K_5792-t1	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (320 aa)
	G7K_5702-t1	CCHC-type domain-containing protein. (362 aa)
	G7K_5837-t1	RT_RNaseH_2 domain-containing protein. (216 aa)
	G7K_6020-t1	AAA domain-containing protein. (378 aa)
	G7K_6122-t1	CULLIN_2 domain-containing protein; Belongs to the cullin family. (838 aa)
	G7K_0057-t1	DNA polymerase. (1257 aa)
	G7K_0139-t1	WD_REPEATS_REGION domain-containing protein. (468 aa)
	G7K_0687-t1	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2222 aa)
	G7K_1051-t1	RPA_C domain-containing protein. (283 aa)
	G7K_1212-t1	WD_REPEATS_REGION domain-containing protein. (1009 aa)
	G7K_1454-t1	Reverse transcriptase domain-containing protein. (773 aa)
	G7K_1043-t1	Uncharacterized protein. (499 aa)
	G7K_1108-t1	Zds_C domain-containing protein. (697 aa)
	G7K_1822-t1	Uncharacterized protein. (167 aa)
	G7K_2158-t2	Replication factor C subunit 1. (1029 aa)
	G7K_2147-t1	AAA domain-containing protein. (358 aa)
	G7K_2158-t1	Replication factor C subunit 1. (1025 aa)
	G7K_2787-t1	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (188 aa)
	G7K_3045-t1	Uncharacterized protein. (265 aa)
	G7K_3697-t1	Uncharacterized protein. (1507 aa)
	G7K_6728-t1	Ubiquitin carboxyl-terminal hydrolase. (683 aa)
	G7K_6133-t1	Uncharacterized protein. (839 aa)
	G7K_3670-t1	Uncharacterized protein. (196 aa)
	G7K_3895-t1	Uncharacterized protein. (1931 aa)

Your Current Organism:

Saitoella complicata

NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G7K_0057-t1	G7K_0139-t1	A0A0E9N792	A0A0E9N7X9	DNA polymerase.	WD_REPEATS_REGION domain-containing protein.	0.733
G7K_0057-t1	G7K_0687-t1	A0A0E9N792	A0A0E9N9S9	DNA polymerase.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.979
G7K_0057-t1	G7K_1043-t1	A0A0E9N792	A0A0E9NBQ2	DNA polymerase.	Uncharacterized protein.	0.992
G7K_0057-t1	G7K_1051-t1	A0A0E9N792	A0A0E9NAJ2	DNA polymerase.	RPA_C domain-containing protein.	0.872
G7K_0057-t1	G7K_1212-t1	A0A0E9N792	A0A0E9NB19	DNA polymerase.	WD_REPEATS_REGION domain-containing protein.	0.614
G7K_0057-t1	G7K_2147-t1	A0A0E9N792	A0A0E9NDS2	DNA polymerase.	AAA domain-containing protein.	0.849
G7K_0057-t1	G7K_2158-t1	A0A0E9N792	A0A0E9NEY9	DNA polymerase.	Replication factor C subunit 1.	0.761
G7K_0057-t1	G7K_2158-t2	A0A0E9N792	A0A0E9NDQ2	DNA polymerase.	Replication factor C subunit 1.	0.761
G7K_0057-t1	G7K_2787-t1	A0A0E9N792	A0A0E9NG03	DNA polymerase.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.719
G7K_0057-t1	G7K_3670-t1	A0A0E9N792	A0A0E9NIM1	DNA polymerase.	Uncharacterized protein.	0.809
G7K_0057-t1	G7K_3697-t1	A0A0E9N792	A0A0E9NIA9	DNA polymerase.	Uncharacterized protein.	0.699
G7K_0057-t1	G7K_4032-t1	A0A0E9N792	A0A0E9NKH8	DNA polymerase.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.921
G7K_0057-t1	G7K_4042-t1	A0A0E9N792	A0A0E9NJQ2	DNA polymerase.	DNA_pol_E_B domain-containing protein.	0.964
G7K_0057-t1	G7K_4466-t1	A0A0E9N792	A0A0E9NKJ2	DNA polymerase.	AAA domain-containing protein.	0.801
G7K_0057-t1	G7K_4551-t1	A0A0E9N792	A0A0E9NLZ3	DNA polymerase.	Uncharacterized protein.	0.782
G7K_0057-t1	G7K_4791-t1	A0A0E9N792	A0A0E9NLE4	DNA polymerase.	Uncharacterized protein.	0.999
G7K_0057-t1	G7K_5074-t1	A0A0E9N792	A0A0E9NMQ8	DNA polymerase.	Uncharacterized protein.	0.809
G7K_0057-t1	G7K_5340-t1	A0A0E9N792	A0A0E9NMX9	DNA polymerase.	AAA domain-containing protein.	0.897
G7K_0057-t1	G7K_5792-t1	A0A0E9N792	A0A0E9NPD8	DNA polymerase.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.973
G7K_0057-t1	G7K_6020-t1	A0A0E9N792	A0A0E9NPZ0	DNA polymerase.	AAA domain-containing protein.	0.801

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