44 items (Saitoella complicata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G7K_6133-t1	Uncharacterized protein. (839 aa)
	G7K_3109-t1	BSD domain-containing protein. (546 aa)
	G7K_4517-t1	Uncharacterized protein. (347 aa)
	G7K_0057-t1	DNA polymerase. (1257 aa)
	G7K_0687-t1	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2222 aa)
	G7K_0460-t1	XPA_C domain-containing protein. (336 aa)
	G7K_1051-t1	RPA_C domain-containing protein. (283 aa)
	G7K_1454-t1	Reverse transcriptase domain-containing protein. (773 aa)
	G7K_1043-t1	Uncharacterized protein. (499 aa)
	G7K_1108-t1	Zds_C domain-containing protein. (697 aa)
	G7K_1681-t1	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (466 aa)
	G7K_1822-t1	Uncharacterized protein. (167 aa)
	G7K_1697-t1	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (466 aa)
	G7K_1972-t1	ERCC4 domain-containing protein. (978 aa)
	G7K_2158-t2	Replication factor C subunit 1. (1029 aa)
	G7K_2147-t1	AAA domain-containing protein. (358 aa)
	G7K_2158-t1	Replication factor C subunit 1. (1025 aa)
	G7K_3045-t1	Uncharacterized protein. (265 aa)
	G7K_3113-t1	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (449 aa)
	G7K_5060-t1	Uncharacterized protein. (282 aa)
	G7K_6606-t1	Helicase ATP-binding domain-containing protein. (841 aa)
	G7K_6921-t1	Uncharacterized protein. (417 aa)
	G7K_6304-t1	RING-type domain-containing protein. (212 aa)
	G7K_6122-t1	CULLIN_2 domain-containing protein; Belongs to the cullin family. (838 aa)
	G7K_6020-t1	AAA domain-containing protein. (378 aa)
	G7K_5702-t1	CCHC-type domain-containing protein. (362 aa)
	G7K_5837-t1	RT_RNaseH_2 domain-containing protein. (216 aa)
	G7K_5792-t1	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (320 aa)
	G7K_5436-t1	Uncharacterized protein. (1267 aa)
	G7K_5340-t1	AAA domain-containing protein. (457 aa)
	G7K_5082-t1	Uncharacterized protein. (609 aa)
	G7K_6513-t1	Uncharacterized protein. (458 aa)
	G7K_4791-t1	Uncharacterized protein. (489 aa)
	G7K_3210-t1	Uncharacterized protein. (100 aa)
	G7K_3465-t1	UmuC domain-containing protein. (680 aa)
	G7K_3349-t1	Uncharacterized protein. (870 aa)
	G7K_3697-t1	Uncharacterized protein. (1507 aa)
	G7K_3670-t1	Uncharacterized protein. (196 aa)
	G7K_3895-t1	Uncharacterized protein. (1931 aa)
	G7K_4169-t1	Uncharacterized protein. (137 aa)
	G7K_4042-t1	DNA_pol_E_B domain-containing protein. (830 aa)
	G7K_3982-t1	Uncharacterized protein. (432 aa)
	G7K_4032-t1	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (604 aa)
	G7K_4466-t1	AAA domain-containing protein. (348 aa)

Your Current Organism:

Saitoella complicata

NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G7K_0057-t1	G7K_0460-t1	A0A0E9N792	A0A0E9N9Z3	DNA polymerase.	XPA_C domain-containing protein.	0.725
G7K_0057-t1	G7K_0687-t1	A0A0E9N792	A0A0E9N9S9	DNA polymerase.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.979
G7K_0057-t1	G7K_1043-t1	A0A0E9N792	A0A0E9NBQ2	DNA polymerase.	Uncharacterized protein.	0.992
G7K_0057-t1	G7K_1051-t1	A0A0E9N792	A0A0E9NAJ2	DNA polymerase.	RPA_C domain-containing protein.	0.872
G7K_0057-t1	G7K_1972-t1	A0A0E9N792	A0A0E9ND59	DNA polymerase.	ERCC4 domain-containing protein.	0.659
G7K_0057-t1	G7K_2147-t1	A0A0E9N792	A0A0E9NDS2	DNA polymerase.	AAA domain-containing protein.	0.849
G7K_0057-t1	G7K_2158-t1	A0A0E9N792	A0A0E9NEY9	DNA polymerase.	Replication factor C subunit 1.	0.761
G7K_0057-t1	G7K_2158-t2	A0A0E9N792	A0A0E9NDQ2	DNA polymerase.	Replication factor C subunit 1.	0.761
G7K_0057-t1	G7K_3113-t1	A0A0E9N792	A0A0E9NGF2	DNA polymerase.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.506
G7K_0057-t1	G7K_3349-t1	A0A0E9N792	A0A0E9NHM1	DNA polymerase.	Uncharacterized protein.	0.548
G7K_0057-t1	G7K_3465-t1	A0A0E9N792	A0A0E9NHJ8	DNA polymerase.	UmuC domain-containing protein.	0.777
G7K_0057-t1	G7K_3670-t1	A0A0E9N792	A0A0E9NIM1	DNA polymerase.	Uncharacterized protein.	0.809
G7K_0057-t1	G7K_3697-t1	A0A0E9N792	A0A0E9NIA9	DNA polymerase.	Uncharacterized protein.	0.699
G7K_0057-t1	G7K_4032-t1	A0A0E9N792	A0A0E9NKH8	DNA polymerase.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.921
G7K_0057-t1	G7K_4042-t1	A0A0E9N792	A0A0E9NJQ2	DNA polymerase.	DNA_pol_E_B domain-containing protein.	0.964
G7K_0057-t1	G7K_4466-t1	A0A0E9N792	A0A0E9NKJ2	DNA polymerase.	AAA domain-containing protein.	0.801
G7K_0057-t1	G7K_4791-t1	A0A0E9N792	A0A0E9NLE4	DNA polymerase.	Uncharacterized protein.	0.999
G7K_0057-t1	G7K_5340-t1	A0A0E9N792	A0A0E9NMX9	DNA polymerase.	AAA domain-containing protein.	0.897
G7K_0057-t1	G7K_5436-t1	A0A0E9N792	A0A0E9NNB5	DNA polymerase.	Uncharacterized protein.	0.745
G7K_0057-t1	G7K_5792-t1	A0A0E9N792	A0A0E9NPD8	DNA polymerase.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.973

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