77 items (Saitoella complicata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G7K_1003-t1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1768 aa)
	G7K_3109-t1	BSD domain-containing protein. (546 aa)
	G7K_3210-t1	Uncharacterized protein. (100 aa)
	G7K_3266-t1	Uncharacterized protein; Belongs to the peptidase C19 family. (1251 aa)
	G7K_3465-t1	UmuC domain-containing protein. (680 aa)
	G7K_3349-t1	Uncharacterized protein. (870 aa)
	G7K_3697-t1	Uncharacterized protein. (1507 aa)
	G7K_3670-t1	Uncharacterized protein. (196 aa)
	G7K_3895-t1	Uncharacterized protein. (1931 aa)
	G7K_4169-t1	Uncharacterized protein. (137 aa)
	G7K_4042-t1	DNA_pol_E_B domain-containing protein. (830 aa)
	G7K_3982-t1	Uncharacterized protein. (432 aa)
	G7K_4032-t1	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (604 aa)
	G7K_4466-t1	AAA domain-containing protein. (348 aa)
	G7K_4517-t1	Uncharacterized protein. (347 aa)
	G7K_4809-t1	Uncharacterized protein. (428 aa)
	G7K_4791-t1	Uncharacterized protein. (489 aa)
	G7K_4551-t1	Uncharacterized protein. (534 aa)
	G7K_5106-t1	Uncharacterized protein. (900 aa)
	G7K_5060-t1	Uncharacterized protein. (282 aa)
	G7K_5082-t1	Uncharacterized protein. (609 aa)
	G7K_5303-t1	Uncharacterized protein. (1107 aa)
	G7K_5275-t1	Uncharacterized protein. (450 aa)
	G7K_5340-t1	AAA domain-containing protein. (457 aa)
	G7K_5436-t1	Uncharacterized protein. (1267 aa)
	G7K_5108-t1	Uncharacterized protein. (308 aa)
	G7K_5475-t1	WD_REPEATS_REGION domain-containing protein. (412 aa)
	G7K_5671-t1	Uncharacterized protein. (233 aa)
	G7K_5677-t1	Uncharacterized protein. (602 aa)
	G7K_5792-t1	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (320 aa)
	G7K_5837-t1	RT_RNaseH_2 domain-containing protein. (216 aa)
	G7K_5702-t1	CCHC-type domain-containing protein. (362 aa)
	G7K_6020-t1	AAA domain-containing protein. (378 aa)
	G7K_6122-t1	CULLIN_2 domain-containing protein; Belongs to the cullin family. (838 aa)
	G7K_6205-t1	PPIase cyclophilin-type domain-containing protein. (1548 aa)
	G7K_6304-t1	RING-type domain-containing protein. (212 aa)
	G7K_6133-t1	Uncharacterized protein. (839 aa)
	G7K_6227-t1	RRM domain-containing protein. (153 aa)
	G7K_6435-t1	RPOL4c domain-containing protein. (166 aa)
	G7K_6513-t1	Uncharacterized protein. (458 aa)
	G7K_6606-t1	Helicase ATP-binding domain-containing protein. (841 aa)
	G7K_6582-t1	RING-type domain-containing protein. (436 aa)
	G7K_6921-t1	Uncharacterized protein. (417 aa)
	G7K_3045-t1	Uncharacterized protein. (265 aa)
	G7K_2997-t1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (122 aa)
	G7K_2158-t1	Replication factor C subunit 1. (1025 aa)
	G7K_2447-t1	USP domain-containing protein; Belongs to the peptidase C19 family. (1085 aa)
	G7K_2357-t1	Uncharacterized protein. (177 aa)
	G7K_2147-t1	AAA domain-containing protein. (358 aa)
	G7K_2158-t2	Replication factor C subunit 1. (1029 aa)
	G7K_2134-t1	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (1007 aa)
	G7K_1696-t1	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1329 aa)
	G7K_1972-t1	ERCC4 domain-containing protein. (978 aa)
	G7K_1697-t1	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (466 aa)
	G7K_1822-t1	Uncharacterized protein. (167 aa)
	G7K_1710-t1	Uncharacterized protein. (1242 aa)
	G7K_1681-t1	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (466 aa)
	G7K_1108-t1	Zds_C domain-containing protein. (697 aa)
	G7K_1043-t1	Uncharacterized protein. (499 aa)
	G7K_1454-t1	Reverse transcriptase domain-containing protein. (773 aa)
	G7K_0942-t1	Uncharacterized protein. (71 aa)
	G7K_1286-t1	RNA_pol_L_2 domain-containing protein. (146 aa)
	G7K_1227-t1	TFIIS central domain-containing protein. (254 aa)
	G7K_1202-t1	Uncharacterized protein. (826 aa)
	G7K_1019-t1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1238 aa)
	G7K_0691-t1	Uncharacterized protein. (353 aa)
	G7K_1051-t1	RPA_C domain-containing protein. (283 aa)
	G7K_3113-t1	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (449 aa)
	G7K_0460-t1	XPA_C domain-containing protein. (336 aa)
	G7K_0687-t1	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2222 aa)
	G7K_0829-t1	Uncharacterized protein. (160 aa)
	G7K_0625-t1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (373 aa)
	G7K_0210-t1	Uncharacterized protein. (271 aa)
	G7K_0287-t2	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
	G7K_0287-t1	Uncharacterized protein. (111 aa)
	G7K_0090-t1	Uncharacterized protein. (844 aa)
	G7K_0057-t1	DNA polymerase. (1257 aa)

Your Current Organism:

Saitoella complicata

NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G7K_0057-t1	G7K_0460-t1	A0A0E9N792	A0A0E9N9Z3	DNA polymerase.	XPA_C domain-containing protein.	0.725
G7K_0057-t1	G7K_0625-t1	A0A0E9N792	A0A0E9N9A5	DNA polymerase.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.400
G7K_0057-t1	G7K_0687-t1	A0A0E9N792	A0A0E9N9S9	DNA polymerase.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.979
G7K_0057-t1	G7K_1043-t1	A0A0E9N792	A0A0E9NBQ2	DNA polymerase.	Uncharacterized protein.	0.992
G7K_0057-t1	G7K_1051-t1	A0A0E9N792	A0A0E9NAJ2	DNA polymerase.	RPA_C domain-containing protein.	0.872
G7K_0057-t1	G7K_1972-t1	A0A0E9N792	A0A0E9ND59	DNA polymerase.	ERCC4 domain-containing protein.	0.659
G7K_0057-t1	G7K_2147-t1	A0A0E9N792	A0A0E9NDS2	DNA polymerase.	AAA domain-containing protein.	0.849
G7K_0057-t1	G7K_2158-t1	A0A0E9N792	A0A0E9NEY9	DNA polymerase.	Replication factor C subunit 1.	0.761
G7K_0057-t1	G7K_2158-t2	A0A0E9N792	A0A0E9NDQ2	DNA polymerase.	Replication factor C subunit 1.	0.761
G7K_0057-t1	G7K_3113-t1	A0A0E9N792	A0A0E9NGF2	DNA polymerase.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.506
G7K_0057-t1	G7K_3349-t1	A0A0E9N792	A0A0E9NHM1	DNA polymerase.	Uncharacterized protein.	0.548
G7K_0057-t1	G7K_3465-t1	A0A0E9N792	A0A0E9NHJ8	DNA polymerase.	UmuC domain-containing protein.	0.777
G7K_0057-t1	G7K_3670-t1	A0A0E9N792	A0A0E9NIM1	DNA polymerase.	Uncharacterized protein.	0.809
G7K_0057-t1	G7K_3697-t1	A0A0E9N792	A0A0E9NIA9	DNA polymerase.	Uncharacterized protein.	0.699
G7K_0057-t1	G7K_4032-t1	A0A0E9N792	A0A0E9NKH8	DNA polymerase.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.921
G7K_0057-t1	G7K_4042-t1	A0A0E9N792	A0A0E9NJQ2	DNA polymerase.	DNA_pol_E_B domain-containing protein.	0.964
G7K_0057-t1	G7K_4466-t1	A0A0E9N792	A0A0E9NKJ2	DNA polymerase.	AAA domain-containing protein.	0.801
G7K_0057-t1	G7K_4551-t1	A0A0E9N792	A0A0E9NLZ3	DNA polymerase.	Uncharacterized protein.	0.782
G7K_0057-t1	G7K_4791-t1	A0A0E9N792	A0A0E9NLE4	DNA polymerase.	Uncharacterized protein.	0.999
G7K_0057-t1	G7K_5340-t1	A0A0E9N792	A0A0E9NMX9	DNA polymerase.	AAA domain-containing protein.	0.897

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