Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CDX25436.1 | CDX27217.1 | MPLDJ20_120105 | MPLDJ20_120202 | Ribonuclease. | NUDIX hydrolase. | 0.825 |
| CDX25436.1 | CDX27678.1 | MPLDJ20_120105 | MPLDJ20_120236 | Ribonuclease. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.839 |
| CDX25436.1 | CDX39049.1 | MPLDJ20_120105 | MPLDJ20_240097 | Ribonuclease. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.825 |
| CDX25436.1 | CDX39166.1 | MPLDJ20_120105 | MPLDJ20_250005 | Ribonuclease. | 3'-5' exonuclease. | 0.962 |
| CDX25436.1 | CDX41593.1 | MPLDJ20_120105 | MPLDJ20_390001 | Ribonuclease. | DEAD/DEAH box helicase domain protein. | 0.541 |
| CDX25436.1 | CDX43535.1 | MPLDJ20_120105 | MPLDJ20_60257 | Ribonuclease. | Polynucleotide adenylyltransferase region; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.608 |
| CDX25436.1 | CDX46935.1 | MPLDJ20_120105 | MPLDJ20_90286 | Ribonuclease. | Helicase domain protein. | 0.533 |
| CDX25436.1 | hfq | MPLDJ20_120105 | MPLDJ20_140119 | Ribonuclease. | Protein hfq (Nif-regulating factor); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.411 |
| CDX25436.1 | hrpB | MPLDJ20_120105 | MPLDJ20_40055 | Ribonuclease. | ATP-dependent (RNA) helicase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.521 |
| CDX25436.1 | ppiB | MPLDJ20_120105 | MPLDJ20_240039 | Ribonuclease. | Peptidyl-prolyl cis-trans isomerase B (rotamase B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.444 |
| CDX25436.1 | rhlE-2 | MPLDJ20_120105 | MPLDJ20_140247 | Ribonuclease. | RNA helicase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the DEAD box helicase family. | 0.541 |
| CDX25436.1 | rnd | MPLDJ20_120105 | MPLDJ20_140408 | Ribonuclease. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.965 |
| CDX25436.1 | rne | MPLDJ20_120105 | MPLDJ20_140259 | Ribonuclease. | Ribonuclease, Rne/Rng family protein; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.456 |
| CDX25436.1 | rph | MPLDJ20_120105 | MPLDJ20_200066 | Ribonuclease. | RNase PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.995 |
| CDX25436.1 | yffH | MPLDJ20_120105 | MPLDJ20_120192 | Ribonuclease. | Putative NUDIX hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.825 |
| CDX27217.1 | CDX25436.1 | MPLDJ20_120202 | MPLDJ20_120105 | NUDIX hydrolase. | Ribonuclease. | 0.825 |
| CDX27217.1 | CDX41593.1 | MPLDJ20_120202 | MPLDJ20_390001 | NUDIX hydrolase. | DEAD/DEAH box helicase domain protein. | 0.834 |
| CDX27217.1 | CDX46935.1 | MPLDJ20_120202 | MPLDJ20_90286 | NUDIX hydrolase. | Helicase domain protein. | 0.834 |
| CDX27217.1 | nnrE | MPLDJ20_120202 | MPLDJ20_140162 | NUDIX hydrolase. | Carbohydrate kinase, YjeF-like protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the [...] | 0.991 |
| CDX27217.1 | rhlE-2 | MPLDJ20_120202 | MPLDJ20_140247 | NUDIX hydrolase. | RNA helicase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the DEAD box helicase family. | 0.834 |
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